RNA–Protein interactions for RNA: ENST00000527275.5

SMPD1-203, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SMPD1, Length 2,188 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-203ENST00000527275 PAFAH2Q99487 392 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 DHRS4Q9BTZ2 278 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 LIMD1Q9UGP4 676 aa19.06■□□□□ 0.64
SMPD1-203ENST00000527275 INTS6Q9UL03 887 aaKnown RBP19.06■□□□□ 0.64
SMPD1-203ENST00000527275 CPP00450 1065 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 PTCRAQ6ISU1 281 aaPredicted RBP19.05■□□□□ 0.64
SMPD1-203ENST00000527275 CNTD1Q8N815 330 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 EBNA1BP2Q99848 306 aaKnown RBP19.05■□□□□ 0.64
SMPD1-203ENST00000527275 PDFQ9HBH1 243 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 MYO10Q9HD67 2058 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 ARNTLO00327 626 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 MLNP12872 115 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 ARF5P84085 180 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 HNRNPDQ14103 355 aaKnown RBP19.05■□□□□ 0.64
SMPD1-203ENST00000527275 AAK1Q2M2I8 961 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 GAB4Q2WGN9 574 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 PLEKHG6Q3KR16 790 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 LRRC8BQ6P9F7 803 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 LINGO4Q6UY18 593 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 PRDM6Q9NQX0 595 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 MAD1L1Q9Y6D9 718 aa19.05■□□□□ 0.64
SMPD1-203ENST00000527275 ZMPSTE24O75844 475 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 FAM107AO95990 144 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 STX2P32856 288 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 MPP2Q14168 576 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 KBTBD12Q3ZCT8 623 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 ETFBKMTQ8IXQ9 262 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 MPP5Q8N3R9 675 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 DCAF4L2Q8NA75 395 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 FATE1Q969F0 183 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 TEKT5Q96M29 485 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 VAT1Q99536 393 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 IL12RB2Q99665 862 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 C2orf49Q9BVC5 232 aaPredicted RBP19.04■□□□□ 0.64
SMPD1-203ENST00000527275 SLC2A11Q9BYW1 496 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 TRABDQ9H4I3 376 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 BRD9Q9H8M2 597 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 KCNK12Q9HB15 430 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 RBM22Q9NW64 420 aaKnown RBP eCLIP19.04■□□□□ 0.64
SMPD1-203ENST00000527275 SENP1Q9P0U3 644 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 VPS51Q9UID3 782 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 GGA2Q9UJY4 613 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 FBXO10Q9UK96 956 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 TRHDEQ9UKU6 1024 aa19.04■□□□□ 0.64
SMPD1-203ENST00000527275 ZBTB24O43167 697 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 TULP3O75386 442 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 GSTA2P09210 222 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 CCT5P48643 541 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 RENBPP51606 427 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 SLC12A1Q13621 1099 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 MARC1Q5VT66 337 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 CPA6Q8N4T0 437 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 ZNF557Q8N988 423 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 ANKRD42Q8N9B4 389 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 MAFAQ8NHW3 353 aaPredicted RBP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 MGARPQ8TDB4 240 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 DCAKDQ8WVC6 231 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 TTLL3Q9Y4R7 772 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 PABPC1P11940 636 aaKnown RBP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 DGKGP49619 791 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 PLK1P53350 603 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 MESP2Q0VG99 397 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 FUT11Q495W5 492 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 PITRM1Q5JRX3 1037 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 UNC5AQ6ZN44 842 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 PRPF39Q86UA1 669 aaKnown RBP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 PLCD3Q8N3E9 789 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 ZNF473Q8WTR7 871 aaKnown RBP19.03■□□□□ 0.64
SMPD1-203ENST00000527275 NSMCE1Q8WV22 266 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 FAM107BQ9H098 131 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 PLAC1Q9HBJ0 212 aa19.03■□□□□ 0.64
SMPD1-203ENST00000527275 SDR42E2A6NKP2 422 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 CD160O95971 181 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 MT-CO1P00395 513 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 IL9P15248 144 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 CD68P34810 354 aaPredicted RBP19.02■□□□□ 0.64
SMPD1-203ENST00000527275 GJA4P35212 333 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 SLC6A11P48066 632 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 LBRQ14739 615 aaKnown RBP19.02■□□□□ 0.64
SMPD1-203ENST00000527275 LRRC14Q15048 493 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 GEN1Q17RS7 908 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 ADIPOR2Q86V24 386 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 ACDQ96AP0 544 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 SMC6Q96SB8 1091 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 RSPH14Q9UHP6 348 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 IKBKGQ9Y6K9 419 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 F5P12259 2224 aa19.02■□□□□ 0.64
SMPD1-203ENST00000527275 A0A1W2PPM1 405 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 HLA-DQB2P05538 268 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 CISD3P0C7P0 127 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 TMCO4Q5TGY1 634 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 TMEM215Q68D42 235 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 NAIF1Q69YI7 327 aaPredicted RBP19.02■□□□□ 0.63
SMPD1-203ENST00000527275 ITPRIPL1Q6GPH6 555 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 TEX26Q8N6G2 289 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 DYDC1Q8WWB3 177 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 SLC44A1Q8WWI5 657 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 CHMP6Q96FZ7 201 aa19.02■□□□□ 0.63
SMPD1-203ENST00000527275 ZNF599Q96NL3 588 aa19.02■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms