RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 UNKQ9C0B0 810 aaKnown RBP17.77■□□□□ 0.44
USH1C-205ENST00000527020 UBE2OQ9C0C9 1292 aaKnown RBP17.77■□□□□ 0.44
USH1C-205ENST00000527020 SLC25A51Q9H1U9 297 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 CYP4F11Q9HBI6 524 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 RGS18Q9NS28 235 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 TBC1D13Q9NVG8 400 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 DNAJB4Q9UDY4 337 aa17.77■□□□□ 0.44
USH1C-205ENST00000527020 J3KR12 359 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 TFEBP19484 476 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 GRK4P32298 578 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 EPHB1P54762 984 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 AP2B1P63010 937 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 NSUN2Q08J23 767 aaKnown RBP eCLIP17.77■□□□□ 0.43
USH1C-205ENST00000527020 CUL3Q13618 768 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 CCNIQ14094 377 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 SEPT6Q14141 434 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 LSM12Q3MHD2 195 aaKnown RBP17.77■□□□□ 0.43
USH1C-205ENST00000527020 ZNF280DQ6N043 979 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 TFAP2DQ7Z6R9 452 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 LMNTD2Q8IXW0 634 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 COLGALT2Q8IYK4 626 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 DEFB107AQ8IZN7 70 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 NUP93Q8N1F7 819 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 IMP4Q96G21 291 aaKnown RBP17.77■□□□□ 0.43
USH1C-205ENST00000527020 PPP1R36Q96LQ0 422 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 LENG8Q96PV6 779 aaPredicted RBP17.77■□□□□ 0.43
USH1C-205ENST00000527020 ARNT2Q9HBZ2 717 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 FNIP2Q9P278 1114 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 FBXO5Q9UKT4 447 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 LRCH1Q9Y2L9 728 aa17.77■□□□□ 0.43
USH1C-205ENST00000527020 NEMP1O14524 444 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 MAP3K7O43318 606 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CNTN5O94779 1100 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 JUNP05412 331 aaKnown RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 HAPLN1P10915 354 aaPredicted RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 CST5P28325 142 aaPredicted RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 EPHA3P29320 983 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CD151P48509 253 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 PRKAA1Q13131 559 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 MBTPS1Q14703 1052 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 ALFQ53S48 1182 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 ZNF789Q5FWF6 425 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 MS4A13Q5J8X5 152 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 RBM20Q5T481 1227 aaKnown RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 SEL1L3Q68CR1 1132 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CNSTQ6PJW8 725 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 TRAF7Q6Q0C0 670 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 RNF111Q6ZNA4 994 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 HMCESQ96FZ2 354 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 ELMO2Q96JJ3 720 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 ZNF385DQ9H6B1 395 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 GMIPQ9P107 970 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CA12O43570 354 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 FKBP6O75344 327 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 MMP2P08253 660 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CRABP2P29373 138 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 HK2P52789 917 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 MAXP61244 160 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 SLC10A7Q0GE19 358 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 HNRNPDQ14103 355 aaKnown RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 NEPROQ6NW34 567 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 GLB1LQ6UWU2 654 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 TTC9BQ8N6N2 239 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 EFCAB3Q8N7B9 438 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 PPFIBP2Q8ND30 876 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 HEXDCQ8WVB3 486 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 UCMAQ8WVF2 138 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CNDP1Q96KN2 507 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 C8orf48Q96LL4 319 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 TTC1Q99614 292 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 OMDQ99983 421 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 RTKNQ9BST9 563 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 PRKD2Q9BZL6 878 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 S100A14Q9HCY8 104 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 CORO1CQ9ULV4 474 aaPredicted RBP17.76■□□□□ 0.43
USH1C-205ENST00000527020 NOD1Q9Y239 953 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 SSX2IPQ9Y2D8 614 aa17.76■□□□□ 0.43
USH1C-205ENST00000527020 TMEM189-UBE2V1I3L0A0 370 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 PAMP19021 973 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 PIK3R1P27986 724 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 SERPINB5P36952 375 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 TBX4P57082 545 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 AAGABQ6PD74 315 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 DCP1BQ8IZD4 617 aaKnown RBP17.75■□□□□ 0.43
USH1C-205ENST00000527020 TXNDC5Q8NBS9 432 aaKnown RBP17.75■□□□□ 0.43
USH1C-205ENST00000527020 MICAL1Q8TDZ2 1067 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 FATE1Q969F0 183 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 FUBP3Q96I24 572 aaKnown RBP eCLIP17.75■□□□□ 0.43
USH1C-205ENST00000527020 KLHL5Q96PQ7 755 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 ZNF184Q99676 751 aaPredicted RBP17.75■□□□□ 0.43
USH1C-205ENST00000527020 NUF2Q9BZD4 464 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 NT5MQ9NPB1 228 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 IGSF5Q9NSI5 407 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 NDE1Q9NXR1 346 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 ARHGAP26Q9UNA1 814 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 SQORQ9Y6N5 450 aa17.75■□□□□ 0.43
USH1C-205ENST00000527020 BUD23O43709 281 aaKnown RBP17.74■□□□□ 0.43
USH1C-205ENST00000527020 RHOQP17081 205 aa17.74■□□□□ 0.43
USH1C-205ENST00000527020 NDST2P52849 883 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms