RNA–Protein interactions for RNA: ENST00000526430.1

NEDD8-204, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 3

Gene NEDD8, Length 286 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-204ENST00000526430 CTNNBL1Q8WYA6 563 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 BHMTQ93088 406 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 NTAN1Q96AB6 310 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 GRAMD1AQ96CP6 724 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 LMLNQ96KR4 655 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 BTN2A3PQ96KV6 586 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 C1orf74Q96LT6 269 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 SLC46A1Q96NT5 459 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 CCNL2Q96S94 520 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 SLC2A11Q9BYW1 496 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 DCLK3Q9C098 648 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 FAM204AQ9H8W3 233 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 CTTNBP2NLQ9P2B4 639 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 ZNF212Q9UDV6 495 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 ANAPC7Q9UJX3 599 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 ATXN7L1Q9ULK2 861 aaPredicted RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 TPX2Q9ULW0 747 aaKnown RBP11.17□□□□□ -0.62
NEDD8-204ENST00000526430 FZD10Q9ULW2 581 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 SCML1Q9UN30 329 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 PCDHGA8Q9Y5G5 932 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 ITPR3Q14573 2671 aa11.17□□□□□ -0.62
NEDD8-204ENST00000526430 DOCK4Q8N1I0 1966 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 IGLV3-10A0A075B6K4 115 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 DRGXA6NNA5 263 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CDRT15L2A8MXV6 281 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 TLR4O00206 839 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 SIGLEC6O43699 453 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 PROSCO94903 275 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 TACR2P21452 398 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 RBMS1P29558 406 aaKnown RBP11.16□□□□□ -0.62
NEDD8-204ENST00000526430 PCK1P35558 622 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CHKAP35790 457 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 GGCXP38435 758 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 HARS2P49590 506 aaKnown RBP11.16□□□□□ -0.62
NEDD8-204ENST00000526430 ARSEP51690 589 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 SLC25A11Q02978 314 aaKnown RBP11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CLN3Q13286 438 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 AUHQ13825 339 aaKnown RBP11.16□□□□□ -0.62
NEDD8-204ENST00000526430 PIGHQ14442 188 aaPredicted RBP11.16□□□□□ -0.62
NEDD8-204ENST00000526430 SPA17Q15506 151 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 SLC45A4Q5BKX6 768 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 TMEM215Q68D42 235 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 FBXL22Q6P050 247 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 ZNF662Q6ZS27 426 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CLEC14AQ86T13 490 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 FAM26EQ8N5C1 309 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 LRRC57Q8N9N7 239 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CCDC112Q8NEF3 446 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 TPCN2Q8NHX9 752 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 FAM71BQ8TC56 605 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 HAPLN3Q96S86 360 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 ARHGAP9Q9BRR9 750 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CIPCQ9C0C6 399 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 OSBPL2Q9H1P3 480 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 GOLPH3Q9H4A6 298 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 EBF2Q9HAK2 575 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 AASDHPPTQ9NRN7 309 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 GPATCH2LQ9NWQ4 482 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 IP6K2Q9UHH9 426 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 ZNF510Q9Y2H8 683 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 CRYBG3Q68DQ2 2970 aa11.16□□□□□ -0.62
NEDD8-204ENST00000526430 MYO1FO00160 1098 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 TRIM38O00635 465 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 BUB1BO60566 1050 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 PPFIA2O75334 1257 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 MOCS2O96007 188 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 SLC2A3P11169 496 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 CKMT1AP12532 417 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 IL4RP24394 825 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 HOXD9P28356 352 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 CCR5P51681 352 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 RPS24P62847 133 aaKnown RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 KRT83P78385 493 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 DAB2P98082 770 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 NRG1Q02297 640 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 RAP1GAP2Q684P5 730 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 ZNF776Q68DI1 518 aaPredicted RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 SLFN11Q7Z7L1 901 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 REXO1L1PQ8IX06 675 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 RHOT2Q8IXI1 618 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 ATP6V0D2Q8N8Y2 350 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 OR52K2Q8NGK3 314 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 OR4C6Q8NH72 309 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 WFDC5Q8TCV5 224 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 SORCS1Q8WY21 1168 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 SGF29Q96ES7 293 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 PRSS16Q9NQE7 514 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 PCSK1NQ9UHG2 260 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 PYCARDQ9ULZ3 195 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 SATB2Q9UPW6 733 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 NCKAP1Q9Y2A7 1128 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 HYOU1Q9Y4L1 999 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 ALG6Q9Y672 507 aa11.15□□□□□ -0.62
NEDD8-204ENST00000526430 ZFC3H1O60293 1989 aaKnown RBP11.15□□□□□ -0.62
NEDD8-204ENST00000526430 A0A1W2PNU3 283 aaPredicted RBP11.14□□□□□ -0.63
NEDD8-204ENST00000526430 GRID2IPA4D2P6 1211 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 LRRC72A6NJI9 287 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 GOLGA6L6A8MZA4 724 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 WNT9AO14904 365 aa11.14□□□□□ -0.63
NEDD8-204ENST00000526430 EFSO43281 561 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms