RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 CEP44Q9C0F1 390 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 MIR1-1HGQ9H1L0 117 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 DUSP15Q9H1R2 295 aaPredicted RBP4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 PABPC3Q9H361 631 aaKnown RBP4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 FZD3Q9NPG1 666 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 SCUBE2Q9NQ36 999 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 ITM2CQ9NQX7 267 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 USP36Q9P275 1121 aaKnown RBP4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 SEPT3Q9UH03 358 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 DNPEPQ9ULA0 475 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 CHKBQ9Y259 395 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 CA5BQ9Y2D0 317 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 COQ6Q9Y2Z9 468 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 FARP1Q9Y4F1 1045 aaPredicted RBP4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 KMT2EQ8IZD2 1858 aa4.66□□□□□ -1.66
CHMP4A-202ENST00000524955 TBC1D3DA0A087WVF3 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3IA0A087WXS9 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3EA0A087X179 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3KA0A087X1G2 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3FA6NER0 549 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ZSCAN5CA6NGD5 496 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 C16orf96A6NNT2 1141 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 MEI4A8MW99 385 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3LB9A6J9 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 C1QTNF3-AMACRE9PGA6 284 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 APOC4-APOC2K7ER74 178 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 NEMP1O14524 444 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 WNT9AO14904 365 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PPP1R12AO14974 1030 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SPINT1O43278 529 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 BUD23O43709 281 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 LIASO43766 372 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 MMP20O60882 483 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 RNGTTO60942 597 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 LILRB5O75023 590 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 USP12O75317 370 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PMPCBO75439 489 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TJP3O95049 919 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PCDH8O95206 1070 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PAPSS2O95340 614 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 POP4O95707 220 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SEMA4FO95754 770 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ADH1BP00325 375 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 GSRP00390 522 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 IFNB1P01574 187 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 APOC2P02655 101 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC4A1P02730 911 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PRNPP04156 253 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 MMP2P08253 660 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3HP0C7X1 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ADRB3P13945 408 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TIMP2P16035 220 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 MX2P20592 715 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 C5AR1P21730 350 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ITPKAP23677 461 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PTPN3P26045 913 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CD68P34810 354 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CHRNA4P43681 627 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 VPS41P49754 854 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 RENBPP51606 427 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PTPN5P54829 565 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ADPRHP54922 357 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 GEMIN4P57678 1058 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CLDN2P57739 230 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TAS2R38P59533 333 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 COPS2P61201 443 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 FAM193AP78312 1265 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SKOR1P84550 965 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CREB5Q02930 508 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SPEM2Q0P670 501 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 KLF1Q13351 362 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 GALNT3Q14435 633 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SIX1Q15475 284 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TRIP13Q15645 432 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF528Q3MIS6 628 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PLK5Q496M5 336 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC31Q49AM3 519 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 INO80DQ53TQ3 878 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC45A4Q5BKX6 768 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF805Q5CZA5 627 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 CFAP58Q5T655 872 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PIP5KL1Q5T9C9 394 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 AGBL4Q5VU57 503 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3GQ6DHY5 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3CQ6IPX1 549 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TCEAL6Q6IPX3 200 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TIGD7Q6NT04 549 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 FBXL19Q6PCT2 694 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 MAMSTRQ6ZN01 415 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 RFLNAQ6ZTI6 216 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 NYAP1Q6ZVC0 841 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ERN2Q76MJ5 926 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ASCL5Q7RTU5 278 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 DSG4Q86SJ6 1040 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TTC7BQ86TV6 843 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 PRPF39Q86UA1 669 aaKnown RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 RGL4Q8IZJ4 473 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 TBC1D3Q8IZP1 549 aaPredicted RBP4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 ZNF567Q8N184 647 aa4.65□□□□□ -1.67
CHMP4A-202ENST00000524955 SLC25A41Q8N5S1 370 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms