RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 ALDH1A3P47895 512 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 IFNAR2P48551 515 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 NCBP1Q09161 790 aaKnown RBP7.39□□□□□ -1.23
NEDD8-203ENST00000524927 HDAC1Q13547 482 aaPredicted RBP7.39□□□□□ -1.23
NEDD8-203ENST00000524927 USP10Q14694 798 aaKnown RBP7.39□□□□□ -1.23
NEDD8-203ENST00000524927 MTF1Q14872 753 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 LLGL1Q15334 1064 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 NAB2Q15742 525 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 VMACQ2NL98 169 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 DCAF12L1Q5VU92 463 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 TCERG1LQ5VWI1 586 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 CEP85Q6P2H3 762 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 ITIH5Q86UX2 942 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 DRC7Q8IY82 874 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 CARFQ8N187 725 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 TTC17Q96AE7 1141 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 AJUBAQ96IF1 538 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 GCNAQ96QF7 691 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 FUCA2Q9BTY2 467 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 TMEM245Q9H330 911 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 RNF41Q9H4P4 317 aaPredicted RBP7.39□□□□□ -1.23
NEDD8-203ENST00000524927 MINDY3Q9H8M7 445 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 FAM204AQ9H8W3 233 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 KMT5AQ9NQR1 393 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 CFAP20Q9Y6A4 193 aaKnown RBP7.39□□□□□ -1.23
NEDD8-203ENST00000524927 SDK2Q58EX2 2172 aa7.39□□□□□ -1.23
NEDD8-203ENST00000524927 COL6A5A8TX70 2615 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 SH3D21A4FU49 640 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 C2orf78A6NCI8 922 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 CDRT15L2A8MXV6 281 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 ZNF213O14771 459 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 SYN3O14994 580 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 CYTH3O43739 400 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 KRT7P08729 469 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 ZNF888P0CJ79 500 aaPredicted RBP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 GNLYP22749 145 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 ACP1P24666 158 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 DDX6P26196 483 aaKnown RBP eCLIP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 TNFRSF4P43489 277 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 PRKCEQ02156 737 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 COBLL1Q53SF7 1204 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 C19orf54Q5BKX5 351 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 CD300LGQ6UXG3 332 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 RSRC2Q7L4I2 434 aaKnown RBP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 NIPA1Q7RTP0 329 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 CLEC14AQ86T13 490 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 TTC7BQ86TV6 843 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 FAM114A1Q8IWE2 563 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 KLHL36Q8N4N3 616 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 BEST2Q8NFU1 509 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 JPH2Q9BR39 696 aaPredicted RBP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 SARGQ9BW04 601 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 PSTPIP2Q9H939 334 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 TBC1D22BQ9NU19 505 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 ING3Q9NXR8 418 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 WSB2Q9NYS7 404 aaPredicted RBP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 EIF2B4Q9UI10 523 aaKnown RBP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 PCDHA6Q9UN73 950 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 ENTPD4Q9Y227 616 aa7.38□□□□□ -1.23
NEDD8-203ENST00000524927 ARHGEF17Q96PE2 2063 aaPredicted RBP7.38□□□□□ -1.23
NEDD8-203ENST00000524927 TMEM131Q92545 1883 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 A0A1W2PQF6 199 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 MYMKA6NI61 221 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 H3BML4 177 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 PTGESO14684 152 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 FFAR3O14843 346 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 YKT6O15498 198 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 TSPAN1O60635 241 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 UBXN7O94888 489 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 KAT7O95251 611 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 NFATC1O95644 943 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 FGAP02671 866 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 APODP05090 189 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 HOXB2P14652 356 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 CSF2RBP32927 897 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 EIF2DP41214 584 aaKnown RBP7.37□□□□□ -1.23
NEDD8-203ENST00000524927 IL9RQ01113 521 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 SMTNL2Q2TAL5 461 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 CTXN3Q4LDR2 81 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 ZMAT1Q5H9K5 638 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 THEMIS2Q5TEJ8 643 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 EMC10Q5UCC4 262 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 AGBL4Q5VU57 503 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 SGMS1Q86VZ5 419 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 HEATR4Q86WZ0 1026 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 GATAD2AQ86YP4 633 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 MCEMP1Q8IX19 187 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 EFCAB13Q8IY85 973 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 EID2Q8N6I1 236 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 CCHCR1Q8TD31 782 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 ADAMTS17Q8TE56 1095 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 SAP25Q8TEE9 199 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 ZNF480Q8WV37 535 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 DACT3Q96B18 629 aaPredicted RBP7.37□□□□□ -1.23
NEDD8-203ENST00000524927 GRAMD1AQ96CP6 724 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 SLC7A6OSQ96CW6 309 aaPredicted RBP7.37□□□□□ -1.23
NEDD8-203ENST00000524927 LCORQ96JN0 433 aaPredicted RBP7.37□□□□□ -1.23
NEDD8-203ENST00000524927 UROC1Q96N76 676 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 PNKPQ96T60 521 aa7.37□□□□□ -1.23
NEDD8-203ENST00000524927 CGRRF1Q99675 332 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms