RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ABCC4O15439 1325 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 MAP3K15Q6ZN16 1313 aa1.89□□□□□ -2.11
CD44-212ENST00000524922 MYO15AQ9UKN7 3530 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 CACNA1GO43497 2377 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 C5orf42Q9H799 3197 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 TRANK1O15050 2925 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 RTL9Q8NET4 1388 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 ASH1LQ9NR48 2969 aaKnown RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 NOTCH3Q9UM47 2321 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 TRBV5-7A0A0A0MS05 114 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 POM121BA6NF01 834 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 YDJCA8MPS7 323 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 KCNJ18B7U540 433 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 KPNA5O15131 536 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 NPHP1O15259 732 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 NKX2-8O15522 239 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 ZSCAN9O15535 394 aaPredicted RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 SPRY3O43610 288 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 CCNT2O60583 730 aaKnown RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 PAPSS2O95340 614 aaPredicted RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 IGKV3-20P01619 116 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 HOXB7P09629 217 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 CETPP11597 493 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MYL4P12829 197 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 ZNF12P17014 697 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 CDC25AP30304 524 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 PRIM2P49643 509 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MRPS5P82675 430 aaKnown RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 ROR2Q01974 943 aaKnown RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 TRAF3Q13114 568 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MAPKAPK3Q16644 382 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 DUSP6Q16828 381 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 FAM76BQ5HYJ3 339 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 TTC39AQ5SRH9 613 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MAP3K21Q5TCX8 1036 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 GFI1BQ5VTD9 330 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 C9orf57Q5W0N0 161 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 C17orf99Q6UX52 265 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 LRIG3Q6UXM1 1119 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 SLC39A5Q6ZMH5 540 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 C15orf52Q6ZUT6 534 aaKnown RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 SMIM5Q71RC9 77 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 C16orf82Q7Z2V1 217 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 C14orf80Q86SX3 495 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 FAM177A1Q8N128 213 aaPredicted RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 MYO1HQ8N1T3 1032 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 FAM47BQ8NA70 645 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 SLC22A17Q8WUG5 538 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 CHMP4AQ9BY43 222 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 SEZ6LQ9BYH1 1024 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MAGEB5Q9BZ81 275 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 DCLK3Q9C098 648 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 TASP1Q9H6P5 420 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 PNPLA8Q9NP80 782 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MYOZ2Q9NPC6 264 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 TXLNGQ9NUQ3 528 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 RGL1Q9NZL6 768 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 THEGQ9P2T0 379 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 MYO6Q9UM54 1294 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 NIP7Q9Y221 180 aaKnown RBP eCLIP1.88□□□□□ -2.11
CD44-212ENST00000524922 UBE2J1Q9Y385 318 aaPredicted RBP1.88□□□□□ -2.11
CD44-212ENST00000524922 ZNF318Q5VUA4 2279 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 ZNF292O60281 2723 aa1.88□□□□□ -2.11
CD44-212ENST00000524922 SIPA1L3O60292 1781 aaPredicted RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 RGPD2P0DJD1 1756 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ANKRD36CQ5JPF3 1778 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 DCHS1Q96JQ0 3298 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 PSME4Q14997 1843 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 CYP3A7-CYP3A51PA0A087WV96 503 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 CXorf65A6NEN9 183 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 RHPN2P1A8MT19 583 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 PRSS47A8MTI9 375 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 PSMD14O00487 310 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ECE2O60344 883 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 SOX30O94993 753 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 VIPP01282 170 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 UMODP07911 640 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 SLC3A2P08195 630 aaKnown RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 CYP3A4P08684 503 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ARSBP15848 533 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 CYP3A7P24462 503 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ITGB8P26012 769 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 GSTM5P46439 218 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ENTPD1P49961 510 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 GAS1P54826 345 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 RRP1P56182 461 aaKnown RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 FAM3BP58499 235 aaPredicted RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 ERVFC1-1P60608 527 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 RPL36AP83881 106 aaKnown RBP1.87□□□□□ -2.11
CD44-212ENST00000524922 GAD2Q05329 585 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ZBTB16Q05516 673 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 NSUN2Q08J23 767 aaKnown RBP eCLIP1.87□□□□□ -2.11
CD44-212ENST00000524922 PPIL2Q13356 520 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 TMEM31Q5JXX7 168 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 ENTPD8Q5MY95 495 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 HMBOX1Q6NT76 420 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 CCDC174Q6PII3 467 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 SLC16A12Q6ZSM3 486 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 Q6ZSV7 163 aa1.87□□□□□ -2.11
CD44-212ENST00000524922 MORC1Q86VD1 984 aa1.87□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms