RNA–Protein interactions for RNA: ENST00000524258.2

CLN8-207, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 2

Gene CLN8, Length 835 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-207ENST00000524258 RECQLP46063 649 aaPredicted RBP12.11□□□□□ -0.47
CLN8-207ENST00000524258 LBRQ14739 615 aaKnown RBP12.11□□□□□ -0.47
CLN8-207ENST00000524258 DUOXA1Q1HG43 343 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 TMEM259Q4ZIN3 620 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 ZNF805Q5CZA5 627 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 WDR45BQ5MNZ6 344 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 ALG1LQ6GMV1 187 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 NPNTQ6UXI9 565 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 GDPD4Q6W3E5 623 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 SPOCD1Q6ZMY3 1216 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 ZNF662Q6ZS27 426 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 DAAM2Q86T65 1068 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 SRLQ86TD4 932 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 TRIM69Q86WT6 500 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 GANCQ8TET4 914 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 LRRN4Q8WUT4 740 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 SPOCK2Q92563 424 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 ECHDC3Q96DC8 303 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 KLHL32Q96NJ5 620 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 MGME1Q9BQP7 344 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 SP110Q9HB58 689 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 FSCN3Q9NQT6 498 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 DKK3Q9UBP4 350 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 SEPT3Q9UH03 358 aa12.11□□□□□ -0.47
CLN8-207ENST00000524258 CACNA1AO00555 2505 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 RALGAPA1Q6GYQ0 2036 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 CNOT1A5YKK6 2376 aaKnown RBP12.1□□□□□ -0.47
CLN8-207ENST00000524258 A0A1W2PR77 199 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 TTC24A2A3L6 582 aaPredicted RBP12.1□□□□□ -0.47
CLN8-207ENST00000524258 LRRC72A6NJI9 287 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 MATN3O15232 486 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 DDX3YO15523 660 aaKnown RBP12.1□□□□□ -0.47
CLN8-207ENST00000524258 FSBPO95073 299 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 IPO7O95373 1038 aaKnown RBP12.1□□□□□ -0.47
CLN8-207ENST00000524258 PIGNO95427 931 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 IGSF6O95976 241 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 WNT1P04628 370 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 KRT10P13645 584 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 TNNT1P13805 278 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 ITIH2P19823 946 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 CCNCP24863 283 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 DPP6P42658 865 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 NEK3P51956 506 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 HNRNPDQ14103 355 aaKnown RBP12.1□□□□□ -0.47
CLN8-207ENST00000524258 FGL2Q14314 439 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 ZNF284Q2VY69 593 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 TRIM61Q5EBN2 209 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 FAM182AQ5T1J6 154 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 SYCP2LQ5T4T6 812 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 NEK5Q6P3R8 708 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 KIAA1328Q86T90 577 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 CAMK1DQ8IU85 385 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 RCOR2Q8IZ40 523 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 ATPAF2Q8N5M1 289 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 CCDC112Q8NEF3 446 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 EXD1Q8NHP7 514 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 KIAA1524Q8TCG1 905 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 HCAR2Q8TDS4 363 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 PDLIM2Q96JY6 352 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 HINFPQ9BQA5 517 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 OSBPL1AQ9BXW6 950 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 SUV39H2Q9H5I1 410 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 PREBQ9HCU5 417 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 TM9SF3Q9HD45 589 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 GGT7Q9UJ14 662 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 SLC6A14Q9UN76 642 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 CAPN6Q9Y6Q1 641 aa12.1□□□□□ -0.47
CLN8-207ENST00000524258 DOCK9Q9BZ29 2069 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3DA0A087WVF3 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3IA0A087WXS9 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3EA0A087X179 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3KA0A087X1G2 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 A0A1B0GTW7 788 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 MACROD2A1Z1Q3 448 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3FA6NER0 549 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 FAM47DPA6NHR8 397 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 MEI4A8MW99 385 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3LB9A6J9 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 KHNYNO15037 678 aaKnown RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 HTRA2O43464 458 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 ZRANB2O95218 330 aaKnown RBP eCLIP12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3HP0C7X1 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 PECAM1P16284 738 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 PTPN7P35236 360 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 LIMK1P53667 647 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 KIF5AQ12840 1032 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 LLGL1Q15334 1064 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 PPP2R5EQ16537 467 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 IFI16Q16666 785 aaKnown RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3GQ6DHY5 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3CQ6IPX1 549 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 TBC1D3Q8IZP1 549 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 RYBPQ8N488 228 aaPredicted RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 ZCCHC9Q8N567 271 aaKnown RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 RNF10Q8N5U6 811 aaKnown RBP12.09□□□□□ -0.47
CLN8-207ENST00000524258 CNTD1Q8N815 330 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 CEP76Q8TAP6 659 aa12.09□□□□□ -0.47
CLN8-207ENST00000524258 ARRDC2Q8TBH0 407 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms