RNA–Protein interactions for RNA: ENST00000523328.5

PVT1-218, Transcript of Pvt1 oncogene, humanhuman

TSL 1 (best)

Gene PVT1, Length 343 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-218ENST00000523328 TM6SF2Q9BZW4 377 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 SIX2Q9NPC8 291 aa23.11■■□□□ 1.29
PVT1-218ENST00000523328 CCDC187A0A096LP49 1063 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 LMO7DNF2Z398 122 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 SLC28A2O43868 658 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 FGFR1OPO95684 399 aaKnown RBP23.1■■□□□ 1.29
PVT1-218ENST00000523328 PNMA6AP0CW24 399 aaPredicted RBP23.1■■□□□ 1.29
PVT1-218ENST00000523328 FLT3P36888 993 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 SCNN1AP37088 669 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 GABRB2P47870 512 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 RPIAP49247 311 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 ADKP55263 362 aaKnown RBP23.1■■□□□ 1.29
PVT1-218ENST00000523328 TRNP1Q6NT89 227 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 PHACTR4Q8IZ21 702 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 ISG20Q96AZ6 181 aaKnown RBP23.1■■□□□ 1.29
PVT1-218ENST00000523328 TBATAQ96M53 351 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 HAPLN3Q96S86 360 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 CCDC3Q9BQI4 270 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 ZYG11BQ9C0D3 744 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 CLPBQ9H078 707 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 TMEM51Q9NW97 253 aa23.1■■□□□ 1.29
PVT1-218ENST00000523328 SCN8AQ9UQD0 1980 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 CXorf51AA0A1B0GTR3 108 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 GTPBP10A4D1E9 387 aaKnown RBP23.09■■□□□ 1.29
PVT1-218ENST00000523328 FOXN3O00409 490 aaPredicted RBP23.09■■□□□ 1.29
PVT1-218ENST00000523328 NTN3O00634 580 aaPredicted RBP23.09■■□□□ 1.29
PVT1-218ENST00000523328 EFSO43281 561 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 ITGA2BP08514 1039 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 CDH5P33151 784 aaPredicted RBP23.09■■□□□ 1.29
PVT1-218ENST00000523328 IGFALSP35858 605 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 KCNC4Q03721 635 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 SPIDRQ14159 915 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 PTK2BQ14289 1009 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 ZSCAN23Q3MJ62 389 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 ZNF805Q5CZA5 627 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 FAM102AQ5T9C2 384 aaPredicted RBP23.09■■□□□ 1.29
PVT1-218ENST00000523328 DRC7Q8IY82 874 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 OR6K2Q8NGY2 324 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 GLMNQ92990 594 aa23.09■■□□□ 1.29
PVT1-218ENST00000523328 PPARGC1AQ9UBK2 798 aaKnown RBP23.09■■□□□ 1.29
PVT1-218ENST00000523328 NEMP1O14524 444 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 AREL1O15033 823 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 ANXA6P08133 673 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 ACVRL1P37023 503 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 THOP1P52888 689 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 XYLT1Q86Y38 959 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 LIN37Q96GY3 246 aaPredicted RBP23.08■■□□□ 1.29
PVT1-218ENST00000523328 CCNL2Q96S94 520 aaPredicted RBP23.08■■□□□ 1.29
PVT1-218ENST00000523328 DNAJC12Q9UKB3 198 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 PADI4Q9UM07 663 aa23.08■■□□□ 1.29
PVT1-218ENST00000523328 LRRK1Q38SD2 2015 aa23.08■■□□□ 1.28
PVT1-218ENST00000523328 LRP4O75096 1905 aa23.08■■□□□ 1.28
PVT1-218ENST00000523328 BOD1L1Q8NFC6 3051 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 YY2O15391 372 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 WISP1O95388 367 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 TSHRP16473 764 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 YPEL5P62699 121 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 VPS36Q86VN1 386 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 FAM131BQ86XD5 332 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 CREBRFQ8IUR6 639 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 FAM71AQ8IYT1 594 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 TMEM35BQ8NCS4 154 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 C18orf8Q96DM3 657 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 SLC13A1Q9BZW2 595 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 NDFIP2Q9NV92 336 aa23.07■■□□□ 1.28
PVT1-218ENST00000523328 ATXN7L1Q9ULK2 861 aaPredicted RBP23.07■■□□□ 1.28
PVT1-218ENST00000523328 UGT2B4P06133 528 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 CELA2BP08218 269 aaPredicted RBP23.06■■□□□ 1.28
PVT1-218ENST00000523328 MACC1Q6ZN28 852 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 B3GNT8Q7Z7M8 397 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 IRF2BP1Q8IU81 584 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 RYBPQ8N488 228 aaPredicted RBP23.06■■□□□ 1.28
PVT1-218ENST00000523328 EXD3Q8N9H8 876 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 OR2AP1Q8NGE2 309 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 ARHGEF2Q92974 986 aaKnown RBP23.06■■□□□ 1.28
PVT1-218ENST00000523328 ARHGEF26Q96DR7 871 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 CFAP57Q96MR6 1250 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 EIF2AK3Q9NZJ5 1116 aaKnown RBP23.06■■□□□ 1.28
PVT1-218ENST00000523328 TMEM59LQ9UK28 342 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 UNC13CQ8NB66 2214 aa23.06■■□□□ 1.28
PVT1-218ENST00000523328 FAM170AA1A519 330 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 KRIT1O00522 736 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 PLD2O14939 933 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 GSRP00390 522 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 C2CD6Q53TS8 623 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 FAXCQ5TGI0 409 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 MANEALQ5VSG8 457 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 ESRP1Q6NXG1 681 aaKnown RBP23.05■■□□□ 1.28
PVT1-218ENST00000523328 KLHL32Q96NJ5 620 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 SYNDIG1Q9H7V2 258 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 MBNL1Q9NR56 388 aaKnown RBP23.05■■□□□ 1.28
PVT1-218ENST00000523328 RWDD2AQ9UIY3 292 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 RABGEF1Q9UJ41 708 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 PCDHGA7Q9Y5G6 932 aa23.05■■□□□ 1.28
PVT1-218ENST00000523328 ARHGAP6O43182 974 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 MMP20O60882 483 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 SLC5A2P31639 672 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 ETFBP38117 255 aa23.04■■□□□ 1.28
PVT1-218ENST00000523328 EIF4A3P38919 411 aaKnown RBP23.04■■□□□ 1.28
PVT1-218ENST00000523328 BPIFB4P59827 614 aa23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms