RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 ZNF135P52742 658 aaPredicted RBP16.46■□□□□ 0.23
CLN8-206ENST00000523237 ZBED6P86452 979 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 SGCGQ13326 291 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 ACAP1Q15027 740 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 CA9Q16790 459 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 HGSNATQ68CP4 663 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 GDPD4Q6W3E5 623 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 GCNT7Q6ZNI0 430 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 RFX8Q6ZV50 586 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 GALNT15Q8N3T1 639 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 EID2Q8N6I1 236 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 OR13H1Q8NG92 308 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 CNDP2Q96KP4 475 aaKnown RBP16.46■□□□□ 0.23
CLN8-206ENST00000523237 CALN1Q9BXU9 219 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 LRRC19Q9H756 370 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 UBA2Q9UBT2 640 aaPredicted RBP16.46■□□□□ 0.23
CLN8-206ENST00000523237 ZMIZ1Q9ULJ6 1067 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 CAPN11Q9UMQ6 739 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 MFHAS1Q9Y4C4 1052 aa16.46■□□□□ 0.23
CLN8-206ENST00000523237 TDRD6O60522 2096 aaKnown RBP16.46■□□□□ 0.22
CLN8-206ENST00000523237 ARHGAP42A6NI28 874 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 ENC1O14682 589 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 LRCH4O75427 683 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 KRT37O76014 449 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 PAK4O96013 591 aaPredicted RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 PCK1P35558 622 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 ABL2P42684 1182 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 CLDN2P57739 230 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 FGL2Q14314 439 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 SKOR2Q2VWA4 1001 aaPredicted RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 ZSCAN23Q3MJ62 389 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 CCDC157Q569K6 752 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 PPP6R3Q5H9R7 873 aaPredicted RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 CCNI2Q6ZMN8 369 aaPredicted RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 CYP4V2Q6ZWL3 525 aaPredicted RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 TMPRSS7Q7RTY8 843 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 ABI3BPQ7Z7G0 1075 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 TTC7BQ86TV6 843 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 DCP2Q8IU60 420 aaKnown RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 CPLX3Q8WVH0 158 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 ZCCHC14Q8WYQ9 949 aaKnown RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 VOPP1Q96AW1 172 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 CELF6Q96J87 481 aaKnown RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 KCTD15Q96SI1 283 aaPredicted RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 KLHL11Q9NVR0 708 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 IFNKQ9P0W0 207 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 LUC7L2Q9Y383 392 aaKnown RBP16.45■□□□□ 0.22
CLN8-206ENST00000523237 HS3ST3A1Q9Y663 406 aa16.45■□□□□ 0.22
CLN8-206ENST00000523237 IGLON5A6NGN9 336 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 PRAMEF11O60813 436 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 ERCC2P18074 760 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 PAPOLAP51003 745 aaKnown RBP16.44■□□□□ 0.22
CLN8-206ENST00000523237 GRM3Q14832 879 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 CYTH1Q15438 398 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 KYAT3Q6YP21 454 aaKnown RBP16.44■□□□□ 0.22
CLN8-206ENST00000523237 Q6ZSR6 202 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 KANSL1Q7Z3B3 1105 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 PTAR1Q7Z6K3 402 aaPredicted RBP16.44■□□□□ 0.22
CLN8-206ENST00000523237 NETO2Q8NC67 525 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 ASB12Q8WXK4 309 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 LENG8Q96PV6 779 aaPredicted RBP16.44■□□□□ 0.22
CLN8-206ENST00000523237 C1QTNF2Q9BXJ5 285 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 CPEB1Q9BZB8 566 aaKnown RBP16.44■□□□□ 0.22
CLN8-206ENST00000523237 SLC39A8Q9C0K1 460 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 ZWILCHQ9H900 591 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 PDFQ9HBH1 243 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 DKK3Q9UBP4 350 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 LHX3Q9UBR4 397 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 ITM2BQ9Y287 266 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 PCDHGA1Q9Y5H4 931 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 ANKRD36A6QL64 1941 aa16.44■□□□□ 0.22
CLN8-206ENST00000523237 J3KR12 359 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 FPGTO14772 594 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 AREL1O15033 823 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 SDC3O75056 442 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 TPM3P06753 285 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 CDK4P11802 303 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 HCAR3P49019 387 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 PIGHQ14442 188 aaPredicted RBP16.43■□□□□ 0.22
CLN8-206ENST00000523237 IFT43Q96FT9 208 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 EXOC2Q96KP1 924 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 BMFQ96LC9 184 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 THAP2Q9H0W7 228 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 GGT7Q9UJ14 662 aa16.43■□□□□ 0.22
CLN8-206ENST00000523237 POM121BA6NF01 834 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 RAD51BO15315 384 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 SPINT1O43278 529 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 RFPL3O75679 317 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 PALMO75781 387 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 GYPCP04921 128 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 C1SP09871 688 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 XPAP23025 273 aaPredicted RBP16.42■□□□□ 0.22
CLN8-206ENST00000523237 DGKAP23743 735 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 ARL4AP40617 200 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 RABIFP47224 123 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 SUOXP51687 545 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 DNAJC3Q13217 504 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 NFKBIBQ15653 356 aa16.42■□□□□ 0.22
CLN8-206ENST00000523237 SMAD1Q15797 465 aaKnown RBP16.42■□□□□ 0.22
CLN8-206ENST00000523237 BOLA3Q53S33 107 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms