RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 GRAMD1CQ8IYS0 662 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 ZNF843Q8N446 348 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 DDX51Q8N8A6 666 aaKnown RBP eCLIP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 PLEKHO2Q8TD55 490 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 SAP25Q8TEE9 199 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 OR8D1Q8WZ84 308 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 INTS4Q96HW7 963 aaKnown RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 FAXDC2Q96IV6 333 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 ZNF578Q96N58 590 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 SERPINB11Q96P15 392 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 PPP1R9BQ96SB3 815 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TSG101Q99816 390 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 RSPH9Q9H1X1 276 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CNGB3Q9NQW8 809 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 FAM8A1Q9UBU6 413 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 USP25Q9UHP3 1055 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 SLC12A6Q9UHW9 1150 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 TSPAN16Q9UKR8 245 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CFAP45Q9UL16 551 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CLEC4EQ9ULY5 219 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 DMTF1Q9Y222 760 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 MUC22E2RYF6 1773 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 CKAP5Q14008 2032 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 COL5A1P20908 1838 aaPredicted RBP6.43□□□□□ -1.38
PABPC1-220ENST00000522658 NBEAQ8NFP9 2946 aa6.43□□□□□ -1.38
PABPC1-220ENST00000522658 F5H5T6 163 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 FFAR2O15552 330 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ACSL4O60488 711 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 C1QL1O75973 258 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 FBXO21O94952 628 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 MT-CO3P00414 261 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 LTFP02788 710 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SRPRAP08240 638 aaKnown RBP6.42□□□□□ -1.38
PABPC1-220ENST00000522658 TBXAS1P24557 533 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-220ENST00000522658 AKT2P31751 481 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 CD70P32970 193 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 NXPH1P58417 271 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ECT2LQ008S8 904 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 TLE3Q04726 772 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SULT2A1Q06520 285 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 CETN1Q12798 172 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 STK4Q13043 487 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ADAM9Q13443 819 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ELAVL3Q14576 367 aaKnown RBP6.42□□□□□ -1.38
PABPC1-220ENST00000522658 STILQ15468 1287 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 PITRM1Q5JRX3 1037 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 RAB41Q5JT25 222 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 KCNT1Q5JUK3 1230 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 RABGAP1LQ5R372 815 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 PIK3R6Q5UE93 754 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ARHGAP17Q68EM7 881 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 FBXL19Q6PCT2 694 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SHC4Q6S5L8 630 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 TMC6Q7Z403 805 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ADIPOR2Q86V24 386 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 HID1Q8IV36 788 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 STK40Q8N2I9 435 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 KDM1BQ8NB78 822 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SLC4A11Q8NBS3 891 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 FBXO15Q8NCQ5 510 aaPredicted RBP6.42□□□□□ -1.38
PABPC1-220ENST00000522658 KIAA0895Q8NCT3 520 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ALPK1Q96QP1 1244 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SPAG5Q96R06 1193 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 CALN1Q9BXU9 219 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 UBXN6Q9BZV1 441 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 NEUROG2Q9H2A3 272 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SYNDIG1Q9H7V2 258 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ERVMER34-1Q9H9K5 563 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 APOBEC3GQ9HC16 384 aaKnown RBP6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ST7Q9NRC1 585 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 DMAC2Q9NW81 257 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 RAB20Q9NX57 234 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 ERVW-1Q9UQF0 538 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 MTMR6Q9Y217 621 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 SLCO1B1Q9Y6L6 691 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 TMEM131Q92545 1883 aa6.42□□□□□ -1.38
PABPC1-220ENST00000522658 URB1O60287 2271 aaKnown RBP6.42□□□□□ -1.38
PABPC1-220ENST00000522658 LAMA5O15230 3695 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 APC2O95996 2303 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 NEMP2A6NFY4 417 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PRAMEF26H0Y7S4 382 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 CETN3O15182 167 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 KLK10O43240 276 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 SLC7A4O43246 635 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 USP12O75317 370 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 LUC7L3O95232 432 aaKnown RBP6.41□□□□□ -1.38
PABPC1-220ENST00000522658 MPOP05164 745 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 VDRP11473 427 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 ACP1P24666 158 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 RECQLP46063 649 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-220ENST00000522658 RGS7P49802 495 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 SGSHP51688 502 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 RAD23BP54727 409 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 DAOAP59103 153 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 ENPEPQ07075 957 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 ZSCAN23Q3MJ62 389 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 POM121L1PQ3SYA9 428 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 C3orf38Q5JPI3 329 aa6.41□□□□□ -1.38
PABPC1-220ENST00000522658 WIPI1Q5MNZ9 446 aaPredicted RBP6.41□□□□□ -1.38
PABPC1-220ENST00000522658 PRAMEF13Q5VWM6 474 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms