RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PTGER1P34995 402 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 YPEL5P62699 121 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 NUCB1Q02818 461 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 RNPS1Q15287 305 aaKnown RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 CCNG2Q16589 344 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 PFKFB3Q16875 520 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 C10orf76Q5T2E6 689 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 SERTAD4-AS1Q5TG53 156 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAM160B2Q86V87 743 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 WDTC1Q8N5D0 677 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 Q8N9P0 234 aaPredicted RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 CADM4Q8NFZ8 388 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAR1Q8WVX9 515 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 CLMNQ96JQ2 1002 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 FCRL4Q96PJ5 515 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 NUDT16L1Q9BRJ7 211 aaKnown RBP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 SPAG4Q9NPE6 437 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 SNTG1Q9NSN8 517 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 ARL8BQ9NVJ2 186 aa4.96□□□□□ -1.62
HMGB1P1-201ENST00000522557 A0A0G2JK05 382 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAM90A8PA6NJQ4 464 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 INPPL1O15357 1258 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 LIASO43766 372 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TIPRLO75663 272 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 EIF2S1P05198 315 aaKnown RBP4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 HOXB5P09067 269 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAM90A13PP0C7W8 464 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAM90A24PP0C7X0 464 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TFEBP19484 476 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 EDN2P20800 178 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TACR3P29371 465 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 ARL3P36405 182 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 GHRHRQ02643 423 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 EPS8Q12929 822 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 IRF3Q14653 427 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 SLC46A3Q7Z3Q1 461 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TADA2BQ86TJ2 420 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 WDR5BQ86VZ2 330 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TTC39CQ8N584 583 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 NANOGP1Q8N7R0 232 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TIGD1Q96MW7 591 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 SYNCQ9H7C4 482 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 MOV10Q9HCE1 1003 aaKnown RBP4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 ZNF304Q9HCX3 659 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 SPATS2LQ9NUQ6 558 aaKnown RBP4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 TRNAU1APQ9NX07 287 aaKnown RBP4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 LIMA1Q9UHB6 759 aaKnown RBP4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 MAFFQ9ULX9 164 aa4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 DDX52Q9Y2R4 599 aaKnown RBP eCLIP4.95□□□□□ -1.62
HMGB1P1-201ENST00000522557 A0A1W2PRG0 241 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 FRMD3A2A2Y4 597 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 C2CD4BA6NLJ0 364 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 CDRT15L2A8MXV6 281 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 VILLO15195 856 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 SEC31AO94979 1220 aaKnown RBP4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 CSH1P0DML2 217 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 CSH2P0DML3 217 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 FMO4P31512 558 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 TTKP33981 857 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 NR4A2P43354 598 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ARSFP54793 590 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 CLDN2P57739 230 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 MC1RQ01726 317 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 BECN1Q14457 450 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 SYTL3Q4VX76 610 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 SOWAHCQ53LP3 525 aaPredicted RBP4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 EARS2Q5JPH6 523 aaKnown RBP4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 CC2D1BQ5T0F9 858 aaKnown RBP4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 PXDC1Q5TGL8 231 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ATG9BQ674R7 924 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 MOB3CQ70IA8 216 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 IKBIPQ70UQ0 350 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 RRM2BQ7LG56 351 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 KRT74Q7RTS7 529 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ARHGAP12Q8IWW6 846 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 UEVLDQ8IX04 471 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 SNAPC3Q92966 411 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ARHGEF2Q92974 986 aaKnown RBP4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 FAM149B1Q96BN6 582 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ZBTB9Q96C00 473 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 KIF1BPQ96EK5 621 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 WDFY2Q96P53 400 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 SIGLEC11Q96RL6 698 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 POLR1BQ9H9Y6 1135 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ENTPD7Q9NQZ7 604 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 TMEM184CQ9NVA4 438 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 HAUS2Q9NVX0 235 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 IL1RAPL1Q9NZN1 696 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ADD3Q9UEY8 706 aaKnown RBP4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 A4GNTQ9UNA3 340 aa4.94□□□□□ -1.62
HMGB1P1-201ENST00000522557 ARHGAP10A1A4S6 786 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 NPIPB11E5RHQ5 1161 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 STRNO43815 780 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 RNF8O76064 485 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 LCKP06239 509 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 IGKV2-30P06310 120 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 AKR1B1P15121 316 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 ACTN2P35609 894 aa4.93□□□□□ -1.62
HMGB1P1-201ENST00000522557 HDAC4P56524 1084 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms