RNA–Protein interactions for RNA: ENST00000521700.5

TRAPPC9-211, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-211ENST00000521700 RAD51Q06609 339 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 FOXC1Q12948 553 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 SHBQ15464 509 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TSR1Q2NL82 804 aaKnown RBP18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TMEM259Q4ZIN3 620 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 ARHGAP36Q6ZRI8 547 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 H2AFVQ71UI9 128 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 IQCHQ86VS3 1027 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 SPATS2Q86XZ4 545 aaKnown RBP18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TP53INP2Q8IXH6 220 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TMEM145Q8NBT3 493 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 ZNF564Q8TBZ8 553 aaPredicted RBP18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TEKT4Q8WW24 435 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 EXOC2Q96KP1 924 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 GDF3Q9NR23 364 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 ETNK2Q9NVF9 386 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 CTTNBP2NLQ9P2B4 639 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 ANGPTL2Q9UKU9 493 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 WASF3Q9UPY6 502 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 BTBD3Q9Y2F9 522 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 TRPM6Q9BX84 2022 aa18.13■□□□□ 0.49
TRAPPC9-211ENST00000521700 DFFAO00273 331 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 FLRT2O43155 660 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 AKR1B10O60218 316 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 PCDHGA12O60330 932 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 TOP3BO95985 862 aaKnown RBP18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 RPS21P63220 83 aaKnown RBP18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 SHC2P98077 582 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 OVGP1Q12889 678 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 TBX2Q13207 712 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 FGL2Q14314 439 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 SARM1Q6SZW1 724 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 CPNE8Q86YQ8 564 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 LZTR1Q8N653 840 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 RHBDD1Q8TEB9 315 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 CTNNBL1Q8WYA6 563 aaPredicted RBP18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 RAB7BQ96AH8 199 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 FEM1CQ96JP0 617 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 CSPG4P5Q96PW8 444 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 MYOCQ99972 504 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 SLC17A9Q9BYT1 436 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 CPEB1Q9BZB8 566 aaKnown RBP18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 DEF6Q9H4E7 631 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 PCDH18Q9HCL0 1135 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 FZD3Q9NPG1 666 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 UVRAGQ9P2Y5 699 aa18.12■□□□□ 0.49
TRAPPC9-211ENST00000521700 SPINT1O43278 529 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 PAK4O96013 591 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 SSR1P43307 286 aaKnown RBP18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 IL10RBQ08334 325 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 KIAA1161Q6NSJ0 714 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 TTC7BQ86TV6 843 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 BAHD1Q8TBE0 780 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 TSC1Q92574 1164 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 KLHDC7BQ96G42 594 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 ERVMER34-1Q9H9K5 563 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 NHEJ1Q9H9Q4 299 aaPredicted RBP18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 SP110Q9HB58 689 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 IPO11Q9UI26 975 aaKnown RBP18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 GGT7Q9UJ14 662 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 ITM2BQ9Y287 266 aa18.11■□□□□ 0.49
TRAPPC9-211ENST00000521700 AREL1O15033 823 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 TSPAN6O43657 245 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 MAGEC1O60732 1142 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 PALMO75781 387 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 PROSCO94903 275 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 TMEM253P0C7T8 217 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 TIMP2P16035 220 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 ITIH2P19823 946 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 HNRNPA2B1P22626 353 aaKnown RBP18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 IL4RP24394 825 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 AKT2P31751 481 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 RGRP47804 291 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 HADHQ16836 314 aaKnown RBP18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 ATP13A4Q4VNC1 1196 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 TMCO3Q6UWJ1 677 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 GLRX5Q86SX6 157 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 GATAD2AQ86YP4 633 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 TSEN2Q8NCE0 465 aaKnown RBP18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 FAM71BQ8TC56 605 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 CCDC42Q96M95 316 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 CNTNAP3BQ96NU0 1288 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 C1QTNF2Q9BXJ5 285 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 CNTNAP3Q9BZ76 1288 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 TRIM5Q9C035 493 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 SPTLC3Q9NUV7 552 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 DKK3Q9UBP4 350 aa18.1■□□□□ 0.49
TRAPPC9-211ENST00000521700 IGLON5A6NGN9 336 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 AKR1B15C9JRZ8 316 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 NEMP1O14524 444 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 RAD51BO15315 384 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 BUB1BO60566 1050 aaPredicted RBP18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 PIGNO95427 931 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 CD48P09326 243 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 THEGLP0DJG4 465 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 SPINK2P20155 84 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 GRK6P43250 576 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 RXRGP48443 463 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 CSNK1DP48730 415 aa18.09■□□□□ 0.49
TRAPPC9-211ENST00000521700 ARSEP51690 589 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms