RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 TOP3BO95985 862 aaKnown RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 CDAP32320 146 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 SHMT1P34896 483 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 KRT20P35900 424 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 CPA2P48052 419 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 CTCFP49711 727 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 COMPP49747 757 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 HSD17B4P51659 736 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 HDAC4P56524 1084 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 PROK1P58294 105 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 POU5F1Q01860 360 aaKnown RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 MTA1Q13330 715 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 SGO1Q5FBB7 561 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 C1QTNF12Q5T7M4 302 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 PAPD7Q5XG87 772 aaKnown RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 KIAA0930Q6ICG6 404 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 OLFML1Q6UWY5 402 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF813Q6ZN06 617 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 CFAP77Q6ZQR2 320 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 CHST9Q7L1S5 443 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 RRM2BQ7LG56 351 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 ANKRD23Q86SG2 305 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 AMIGO2Q86SJ2 522 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 WDR5BQ86VZ2 330 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM47BQ8NA70 645 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 MCPH1Q8NEM0 835 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 SLC22A18Q96BI1 424 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM149B1Q96BN6 582 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 FEM1CQ96JP0 617 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 OR2A14Q96R47 310 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 TKTL2Q9H0I9 626 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 ASAH2Q9NR71 780 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 BABAM1Q9NWV8 329 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 ASB6Q9NWX5 421 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 SH3BP4Q9P0V3 963 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 ZNF70Q9UC06 446 aaPredicted RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 CNOT8Q9UFF9 292 aaKnown RBP3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 TNFSF13BQ9Y275 285 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 PCDHGB5Q9Y5G0 923 aa3.63□□□□□ -1.83
HMGN1P28-201ENST00000521340 KAT6AQ92794 2004 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 A0A087X1B8 175 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM237AA0A1B0GTK4 181 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 OR2A25A4D2G3 310 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 LRRC3CA6NJW4 275 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 MYO1GB0I1T2 1018 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 STRNO43815 780 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 CSPG5O95196 566 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 STARD3NLO95772 234 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 GCP02774 474 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 TFP02787 698 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 LCKP06239 509 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 SRD5A1P18405 259 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 AGAP20933 346 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 MCM7P33993 719 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 DPP6P42658 865 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 GABRB2P47870 512 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 PPP5CP53041 499 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 ROR1Q01973 937 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 GRIK3Q13003 919 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 CHAF1BQ13112 559 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 OLIG2Q13516 323 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 SHBQ15464 509 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 TAF11Q15544 211 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 SMN1Q16637 294 aaKnown RBP3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 ALDH1L2Q3SY69 923 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 FAM133BQ5BKY9 247 aaKnown RBP3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 CFAP58Q5T655 872 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 GARNL3Q5VVW2 1013 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 TMEM268Q5VZI3 342 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 SARM1Q6SZW1 724 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 SERPINA13PQ6UXR4 307 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 NOXA1Q86UR1 476 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 IL17RCQ8NAC3 791 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 KDM1BQ8NB78 822 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 PIGKQ92643 395 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 FIZ1Q96SL8 496 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 PRRX2Q99811 253 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 C1QTNF5Q9BXJ0 243 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 CPNE5Q9HCH3 593 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 WDR6Q9NNW5 1121 aaKnown RBP3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 ARL8BQ9NVJ2 186 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 HAO1Q9UJM8 370 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 RPS6KA6Q9UK32 745 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 PADI1Q9ULC6 663 aa3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 WDR33Q9C0J8 1336 aaKnown RBP3.62□□□□□ -1.83
HMGN1P28-201ENST00000521340 TRBV5-3A0A0A0MS03 114 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DDTLA6NHG4 134 aaPredicted RBP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 FOXO6A8MYZ6 492 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 B4DLN1 442 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 KLRF2D3W0D1 207 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 SCAMP1O15126 338 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 INPPL1O15357 1258 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 SEC14L5O43304 696 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 DKC1O60832 514 aaKnown RBP eCLIP3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 TSPAN9O75954 239 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 CBX6O95503 412 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 HOXB5P09067 269 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 PTPN2P17706 415 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 CTPS1P17812 591 aa3.61□□□□□ -1.83
HMGN1P28-201ENST00000521340 TFEBP19484 476 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms