RNA–Protein interactions for RNA: ENST00000520755.5

LSM1-203, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best) BASIC

Gene LSM1, Length 975 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-203ENST00000520755 STIP1P31948 543 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 RPL22P35268 128 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 RENBPP51606 427 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 MAXP61244 160 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 DR1Q01658 176 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 DHX34Q14147 1143 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 ZNF235Q14590 738 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 TRIP13Q15645 432 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 P3H1Q32P28 736 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 CARD16Q5EG05 197 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 ATXN7L2Q5T6C5 722 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 ZNF776Q68DI1 518 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 MMAAQ8IVH4 418 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 CHST14Q8NCH0 376 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 OR2A12Q8NGT7 310 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 OR6K2Q8NGY2 324 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 GRK7Q8WTQ7 553 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 OR8D1Q8WZ84 308 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 PRCCQ92733 491 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 ISG20Q96AZ6 181 aaKnown RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 SIPA1Q96FS4 1042 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 AGAP3Q96P47 875 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 CINPQ9BW66 212 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 RSPH9Q9H1X1 276 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 FBRSQ9HAH7 460 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 PCDH9Q9HC56 1237 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 KLHL8Q9P2G9 620 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 SEPT3Q9UH03 358 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 EBF1Q9UH73 591 aa15.52■□□□□ 0.08
LSM1-203ENST00000520755 FARP1Q9Y4F1 1045 aaPredicted RBP15.52■□□□□ 0.08
LSM1-203ENST00000520755 LRRK1Q38SD2 2015 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 FANCMQ8IYD8 2048 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 PLXND1Q9Y4D7 1925 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 TTC24A2A3L6 582 aaPredicted RBP15.51■□□□□ 0.07
LSM1-203ENST00000520755 F5H423 210 aaPredicted RBP15.51■□□□□ 0.07
LSM1-203ENST00000520755 OPHN1O60890 802 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 METTL18O95568 372 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 IGSF6O95976 241 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 GSRP00390 522 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 IL1BP01584 269 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 KRT14P02533 472 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 MMP2P08253 660 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 HOXA6P31267 233 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 PSMD8P48556 350 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 CCNHP51946 323 aaPredicted RBP15.51■□□□□ 0.07
LSM1-203ENST00000520755 RPS14P62263 151 aaKnown RBP15.51■□□□□ 0.07
LSM1-203ENST00000520755 SNRPD1P62314 119 aaKnown RBP15.51■□□□□ 0.07
LSM1-203ENST00000520755 NIPAL4Q0D2K0 466 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 PTK6Q13882 451 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 ZNF528Q3MIS6 628 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 DPY19L3Q6ZPD9 716 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 DSG4Q86SJ6 1040 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 LONP2Q86WA8 852 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 OR2AP1Q8NGE2 309 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 ARRDC2Q8TBH0 407 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 GDAP1L1Q96MZ0 367 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 RUNDC3BQ96NL0 473 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 FAM129BQ96TA1 746 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 VAT1Q99536 393 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 GBA3Q9H227 469 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 ZDHHC6Q9H6R6 413 aa15.51■□□□□ 0.07
LSM1-203ENST00000520755 BHMG1C9JSJ3 638 aaPredicted RBP15.5■□□□□ 0.07
LSM1-203ENST00000520755 ZNF189O75820 626 aaPredicted RBP15.5■□□□□ 0.07
LSM1-203ENST00000520755 GAS8O95995 478 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 ACADMP11310 421 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 PSMB4P28070 264 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 VPS41P49754 854 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 DSC2Q02487 901 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 LMNB2Q03252 620 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 TCF15Q12870 199 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 POM121L1PQ3SYA9 428 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 FAXCQ5TGI0 409 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 C8orf74Q6P047 294 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 GSTA5Q7RTV2 222 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 WDR5BQ86VZ2 330 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 KLHDC8BQ8IXV7 354 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 BBS5Q8N3I7 341 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 TAB3Q8N5C8 712 aaPredicted RBP15.5■□□□□ 0.07
LSM1-203ENST00000520755 CCDC89Q8N998 374 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 GRIN3AQ8TCU5 1115 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 RLN3Q8WXF3 142 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 LRRC1Q9BTT6 524 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 MLPHQ9BV36 600 aaPredicted RBP15.5■□□□□ 0.07
LSM1-203ENST00000520755 FAM126AQ9BYI3 521 aaPredicted RBP15.5■□□□□ 0.07
LSM1-203ENST00000520755 GLOD4Q9HC38 313 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 CD93Q9NPY3 652 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 ZSCAN32Q9NX65 697 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 IL36AQ9UHA7 158 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 TRHDEQ9UKU6 1024 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 INVSQ9Y283 1065 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 HCN4Q9Y3Q4 1203 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 TTLL3Q9Y4R7 772 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 CEP192Q8TEP8 1941 aa15.5■□□□□ 0.07
LSM1-203ENST00000520755 ZNF106Q9H2Y7 1883 aaKnown RBP15.49■□□□□ 0.07
LSM1-203ENST00000520755 CCDC163A0A0D9SF12 145 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 C1QTNF3-AMACRE9PGA6 284 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 ALOX15BO15296 676 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 MID1O15344 667 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 INSIG1O15503 277 aa15.49■□□□□ 0.07
LSM1-203ENST00000520755 NEBLO76041 1014 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms