RNA–Protein interactions for RNA: ENST00000520700.1

TRAM1-203, Transcript of translocation associated membrane protein 1, humanhuman

TSL 5

Gene TRAM1, Length 542 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAM1-203ENST00000520700 A0A1W2PQ67 120 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 KRIT1O00522 736 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 AXIN1O15169 862 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 KCNN4O15554 427 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 BNIP3LO60238 219 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 OPHN1O60890 802 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 DNTTP04053 509 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 PAFAH1B1P43034 410 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 CCDC15Q0P6D6 951 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 ZNF805Q5CZA5 627 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 GDPD4Q6W3E5 623 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 B4GALNT4Q76KP1 1039 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 PID1Q7Z2X4 250 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 KBTBD6Q86V97 674 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 LONP2Q86WA8 852 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 RYBPQ8N488 228 aaPredicted RBP17.62■□□□□ 0.41
TRAM1-203ENST00000520700 ATL2Q8NHH9 583 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 ECHDC3Q96DC8 303 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 IMP4Q96G21 291 aaKnown RBP17.62■□□□□ 0.41
TRAM1-203ENST00000520700 EXOC2Q96KP1 924 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 FCRL5Q96RD9 977 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 SEMA3CQ99985 751 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 HDAC8Q9BY41 377 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 SUV39H2Q9H5I1 410 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 ATP13A3Q9H7F0 1226 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 C10orf88Q9H8K7 445 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 ZNF148Q9UQR1 794 aa17.62■□□□□ 0.41
TRAM1-203ENST00000520700 GOLGA6L10A0A0M3HER8 536 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 TSPAN11A1L157 253 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 TRAFD1O14545 582 aaPredicted RBP17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SLC7A4O43246 635 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 HTRA2O43464 458 aaPredicted RBP17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SOCS5O75159 536 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 IL1BP01584 269 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SP9P0CG40 484 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ITGB7P26010 798 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 CD68P34810 354 aaPredicted RBP17.61■□□□□ 0.41
TRAM1-203ENST00000520700 CNR2P34972 360 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SUOXP51687 545 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 MAXP61244 160 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 LMNB2Q03252 620 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 NIPAL4Q0D2K0 466 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 TTC31Q49AM3 519 aaPredicted RBP17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ANKRD20A2Q5SQ80 823 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ANKRD20A1Q5TYW2 823 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ANKRD20A3Q5VUR7 823 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 KLHDC8BQ8IXV7 354 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ZBTB44Q8NCP5 570 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 PPP1R16AQ96I34 528 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 NSMCE3Q96MG7 304 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SPATA13Q96N96 652 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 AGAP3Q96P47 875 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 PPP1R2P1Q96PQ5 205 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 TMEM121Q9BTD3 319 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ZDHHC6Q9H6R6 413 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SCUBE2Q9NQ36 999 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 ZSCAN32Q9NX65 697 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SEPT10Q9P0V9 454 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 BCCIPQ9P287 314 aaKnown RBP eCLIP17.61■□□□□ 0.41
TRAM1-203ENST00000520700 FEZ2Q9UHY8 353 aaPredicted RBP17.61■□□□□ 0.41
TRAM1-203ENST00000520700 FZD4Q9ULV1 537 aa17.61■□□□□ 0.41
TRAM1-203ENST00000520700 SHROOM3Q8TF72 1996 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 MID1O15344 667 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 ZNF500O60304 480 aaPredicted RBP17.6■□□□□ 0.41
TRAM1-203ENST00000520700 MMP2P08253 660 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 SERPINF2P08697 491 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 ACADMP11310 421 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 SERPINA4P29622 427 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 OXTRP30559 389 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 DRD3P35462 400 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 DEKP35659 375 aaKnown RBP17.6■□□□□ 0.41
TRAM1-203ENST00000520700 P2RY2P41231 377 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 FNTAP49354 379 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 TPMTP51580 245 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 BCL2L1Q07817 233 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 IHHQ14623 411 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 P3H1Q32P28 736 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 MAP7D1Q3KQU3 841 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 USP39Q53GS9 565 aaKnown RBP17.6■□□□□ 0.41
TRAM1-203ENST00000520700 ITPRIPL1Q6GPH6 555 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 TSSK4Q6SA08 328 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 C4orf22Q6V702 233 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 PRPF39Q86UA1 669 aaKnown RBP17.6■□□□□ 0.41
TRAM1-203ENST00000520700 PGBD3Q8N328 593 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 FAM71DQ8N9W8 422 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 OR6K2Q8NGY2 324 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 KIF18AQ8NI77 898 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 MAGOHBQ96A72 148 aaKnown RBP17.6■□□□□ 0.41
TRAM1-203ENST00000520700 AP1M1Q9BXS5 423 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 SLC6A17Q9H1V8 727 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 VPS45Q9NRW7 570 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 KLHL8Q9P2G9 620 aaPredicted RBP17.6■□□□□ 0.41
TRAM1-203ENST00000520700 CDC23Q9UJX2 597 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 NCKAP1Q9Y2A7 1128 aa17.6■□□□□ 0.41
TRAM1-203ENST00000520700 CCDC188H7C350 402 aa17.59■□□□□ 0.41
TRAM1-203ENST00000520700 PDE2AO00408 941 aaPredicted RBP17.59■□□□□ 0.41
TRAM1-203ENST00000520700 FZD6O60353 706 aa17.59■□□□□ 0.41
TRAM1-203ENST00000520700 PHF2O75151 1096 aa17.59■□□□□ 0.41
TRAM1-203ENST00000520700 UGT2B4P06133 528 aa17.59■□□□□ 0.41
TRAM1-203ENST00000520700 GKP32189 559 aa17.59■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms