RNA–Protein interactions for RNA: ENST00000520493.1

SQLE-204, Transcript of squalene epoxidase, humanhuman

TSL 3

Gene SQLE, Length 737 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-204ENST00000520493 BRSK2Q8IWQ3 736 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 C11orf65Q8NCR3 313 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 METTL6Q8TCB7 284 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 RUFY2Q8WXA3 655 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 CNOT9Q92600 299 aaKnown RBP4.33□□□□□ -1.72
SQLE-204ENST00000520493 KCNJ9Q92806 393 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 EYA3Q99504 573 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.33□□□□□ -1.72
SQLE-204ENST00000520493 CTDSP1Q9GZU7 261 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 RANBP17Q9H2T7 1088 aaKnown RBP4.33□□□□□ -1.72
SQLE-204ENST00000520493 EPHX3Q9H6B9 360 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 SYNCQ9H7C4 482 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 TXNRD2Q9NNW7 524 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 WWOXQ9NZC7 414 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 FBXO40Q9UH90 709 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 SLC25A13Q9UJS0 675 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 SARDHQ9UL12 918 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 CLDN16Q9Y5I7 305 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 LYVE1Q9Y5Y7 322 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 PSAT1Q9Y617 370 aa4.33□□□□□ -1.72
SQLE-204ENST00000520493 C17orf113A0A1B0GUU1 675 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 KCNJ18B7U540 433 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 HBP1O60381 514 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 DKC1O60832 514 aaKnown RBP eCLIP4.32□□□□□ -1.72
SQLE-204ENST00000520493 URODP06132 367 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 RFPL3SP0C7P2 107 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 T-ENOLP0DO92 83 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 AKR1B1P15121 316 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 GGT5P36269 586 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 MLH1P40692 756 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 SOX2P48431 317 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 HTR6P50406 440 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 TERF1P54274 439 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 UFM1P61960 85 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 ROR1Q01973 937 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 ACVR2BQ13705 512 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 INPP5JQ15735 1006 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 TBCEQ15813 527 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 MIDNQ504T8 468 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 RUSC1-AS1Q66K80 236 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 KIAA1161Q6NSJ0 714 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 SLC22A25Q6T423 547 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 KLHL24Q6TFL4 600 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 LRIG3Q6UXM1 1119 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 PXKQ7Z7A4 578 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 PAQR4Q8N4S7 273 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 OR52N4Q8NGI2 321 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 WIPF2Q8TF74 440 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 ZFPM2Q8WW38 1151 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 THOC3Q96J01 351 aaKnown RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 GPR78Q96P69 363 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 GATA5Q9BWX5 397 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 HDHD5Q9BXW7 423 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 CADM1Q9BY67 442 aaKnown RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 USP44Q9H0E7 712 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 ALDH8A1Q9H2A2 487 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 BRF2Q9HAW0 419 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 MLXIPLQ9NP71 852 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 EIF2B3Q9NR50 452 aaKnown RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 TLR8Q9NR97 1041 aaKnown RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 ZBTB40Q9NUA8 1239 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 ZDHHC7Q9NXF8 308 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 MSRB1Q9NZV6 116 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 NFKBIL1Q9UBC1 381 aaPredicted RBP4.32□□□□□ -1.72
SQLE-204ENST00000520493 ZNF580Q9UK33 172 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 COG5Q9UP83 839 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 CAMK2AQ9UQM7 478 aa4.32□□□□□ -1.72
SQLE-204ENST00000520493 RUSC2Q8N2Y8 1516 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 TRBV5-3A0A0A0MS03 114 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 SYNDIG1LA6NDD5 238 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 NPIPB15A6NHN6 443 aaPredicted RBP4.31□□□□□ -1.72
SQLE-204ENST00000520493 P4HA2O15460 535 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 TSPAN9O75954 239 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 NDUFB8O95169 186 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 STARD3NLO95772 234 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 MLYCDO95822 493 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 PEPDP12955 493 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 THBS3P49746 956 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 BLKP51451 505 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 SHC2P98077 582 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 MYBPC2Q14324 1141 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 WTAPQ15007 396 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 PSMD6Q15008 389 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 SLC18A3Q16572 532 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 PLK5Q496M5 336 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 SH2D4BQ5SQS7 431 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 ISM2Q6H9L7 571 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 ZNF549Q6P9A3 640 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 ZNF474Q6S9Z5 364 aaPredicted RBP4.31□□□□□ -1.72
SQLE-204ENST00000520493 RTL10Q7L3V2 364 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 MON1AQ86VX9 555 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 RHPN2Q8IUC4 686 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 TMEM199Q8N511 208 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 IGFBPL1Q8WX77 278 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 USP6NLQ92738 828 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 FRG2BQ96QU4 278 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 ABHD14AQ9BUJ0 271 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 FZD3Q9NPG1 666 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 THSD1Q9NS62 852 aa4.31□□□□□ -1.72
SQLE-204ENST00000520493 TMEM248Q9NWD8 314 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms