RNA–Protein interactions for RNA: ENST00000520002.5

CSMD1-206, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-206ENST00000520002 ANKRD6Q9Y2G4 727 aa8.78□□□□□ -1
CSMD1-206ENST00000520002 SLCO1B7G3V0H7 640 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 RNASEH1O60930 286 aaKnown RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 TCEA3O75764 348 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 MPOP05164 745 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 EIF4BP23588 611 aaKnown RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 IL18Q14116 193 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 TMC7Q7Z402 723 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 WDR49Q8IV35 697 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 MINDY2Q8NBR6 621 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 TOP1MTQ969P6 601 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 TMEM169Q96HH4 297 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 GMCL1Q96IK5 515 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 FRMD6Q96NE9 622 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 MTIF3Q9H2K0 278 aaKnown RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 XPNPEP3Q9NQH7 507 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 DNAJC11Q9NVH1 559 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 RAD54BQ9Y620 910 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 GSC2O15499 205 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 RECQL5O94762 991 aaPredicted RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 TKTL1P51854 596 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 BOP1Q14137 746 aaKnown RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 RFX4Q33E94 735 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 KHDC1Q4VXA5 237 aaKnown RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 LACTB2Q53H82 288 aaPredicted RBP8.77□□□□□ -1
CSMD1-206ENST00000520002 COQ3Q9NZJ6 369 aa8.77□□□□□ -1
CSMD1-206ENST00000520002 RIMS1Q86UR5 1692 aaKnown RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 FAM240BA0A1B0GVZ2 78 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 DCDC2CA8MYV0 355 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CES2O00748 559 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CD151P48509 253 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 LIN54Q6MZP7 749 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MACC1Q6ZN28 852 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 PQLC1Q8N2U9 271 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MREGQ8N565 214 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 LPCAT1Q8NF37 534 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 TMEM176AQ96HP8 235 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 TEKT5Q96M29 485 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CPNE1Q99829 537 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 EMILIN2Q9BXX0 1053 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 UGT2B28Q9BY64 529 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 NKX1-2Q9UD57 310 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ARHGEF28Q8N1W1 1705 aaKnown RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CELF2O95319 508 aaKnown RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 OLR1P78380 273 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 TGM3Q08188 693 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CCNG2Q16589 344 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 FBXO39Q8N4B4 442 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ZCCHC9Q8N567 271 aaKnown RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 AAASQ9NRG9 546 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 TBC1D13Q9NVG8 400 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 EXD2Q9NVH0 621 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ZSCAN5BA6NJL1 495 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 OR6B1O95007 311 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MGAT1P26572 445 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CCR1P32246 355 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MAN2A2P49641 1150 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CLK2P49760 499 aaKnown RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 COLEC12Q5KU26 742 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 AKAP1Q92667 903 aaKnown RBP eCLIP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CHIAQ9BZP6 476 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 VPS4AQ9UN37 437 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 PRAMEF33A0A0G2JMD5 474 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 DHRS12A0PJE2 317 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 PRAMEF10O60809 474 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 NPR2P20594 1047 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ABRAQ8N0Z2 381 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 GJD4Q96KN9 370 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 TBL1YQ9BQ87 522 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 SAV1Q9H4B6 383 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 RPH3AQ9Y2J0 694 aaPredicted RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 NCAM2O15394 837 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MSL3P1P0C860 447 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 RCVRNP35243 200 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CD83Q01151 205 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ARSHQ5FYA8 562 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ZNF720Q7Z2F6 126 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ANKRD23Q86SG2 305 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 SPOCK2Q92563 424 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 APBB2Q92870 758 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 NPAS2Q99743 824 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 VTI1BQ9UEU0 232 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 KIAA1257Q9ULG3 409 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CCDC88AQ3V6T2 1871 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 PRR5-ARHGAP8B1AHC4 643 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 FAM47E-STBD1D6RA91 191 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 KPNA6O60684 536 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MT-ND1P03886 318 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CKBP12277 381 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ARHGAP8P85298 464 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 ECT2LQ008S8 904 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CCDC28AQ8IWP9 274 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 CDHR5Q9HBB8 845 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 AGO4Q9HCK5 861 aaKnown RBP8.77□□□□□ -1.01
CSMD1-206ENST00000520002 MALT1Q9UDY8 824 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 DEPDC5O75140 1603 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 NWD1Q149M9 1564 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 C12orf71A8MTZ7 269 aa8.77□□□□□ -1.01
CSMD1-206ENST00000520002 DYRK3O43781 588 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms