RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 FADS3Q9Y5Q0 445 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 TRPM6Q9BX84 2022 aa13.5□□□□□ -0.25
VEGFA-219ENST00000518824 PCNX2A6NKB5 2137 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 RAD51BO15315 384 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 MFSD11O43934 449 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SH3BP5O60239 455 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 PCDH8O95206 1070 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 PEX11BO96011 259 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 PRKCGP05129 697 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 NEK3P51956 506 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SEMG2Q02383 582 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SLC10A7Q0GE19 358 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 KRT81Q14533 505 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SHBQ15464 509 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 ZNF805Q5CZA5 627 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 GDPD4Q6W3E5 623 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 PRPF39Q86UA1 669 aaKnown RBP13.49□□□□□ -0.25
VEGFA-219ENST00000518824 ZSWIM9Q86XI8 627 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SPATS2Q86XZ4 545 aaKnown RBP13.49□□□□□ -0.25
VEGFA-219ENST00000518824 PGBD5Q8N414 524 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 RAPGEF5Q92565 580 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 GDAP1L1Q96MZ0 367 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SP110Q9HB58 689 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 PREBQ9HCU5 417 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 DYRK4Q9NR20 520 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 IPO11Q9UI26 975 aaKnown RBP13.49□□□□□ -0.25
VEGFA-219ENST00000518824 BTBD3Q9Y2F9 522 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 NCOR2Q9Y618 2525 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 LRRK1Q38SD2 2015 aa13.49□□□□□ -0.25
VEGFA-219ENST00000518824 SPAARA0A1B0GVQ0 90 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 RCCD1A6NED2 376 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 SOWAHDA6NJG2 315 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 VILLO15195 856 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 MAFKO60675 156 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 PALMO75781 387 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 MTA2O94776 668 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 IGSF6O95976 241 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 TOP3BO95985 862 aaKnown RBP13.48□□□□□ -0.25
VEGFA-219ENST00000518824 TIMP2P16035 220 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 CD38P28907 300 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 CLDN2P57739 230 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 IL10RBQ08334 325 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 SLC10A2Q12908 348 aaPredicted RBP13.48□□□□□ -0.25
VEGFA-219ENST00000518824 TMEM259Q4ZIN3 620 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 NCBP2-AS2Q69YL0 99 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 NAPEPLDQ6IQ20 393 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 FBXL19Q6PCT2 694 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 TMCO3Q6UWJ1 677 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 ADAT2Q7Z6V5 191 aaKnown RBP13.48□□□□□ -0.25
VEGFA-219ENST00000518824 HORMAD1Q86X24 394 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 CAMK1DQ8IU85 385 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 PQLC3Q8N755 202 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 CASKIN2Q8WXE0 1202 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 RFFLQ8WZ73 363 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 PPP1R16AQ96I34 528 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 ZDHHC5Q9C0B5 715 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 SALL4Q9UJQ4 1053 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 CABIN1Q9Y6J0 2220 aa13.48□□□□□ -0.25
VEGFA-219ENST00000518824 IGLON5A6NGN9 336 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 CSRP1P21291 193 aaKnown RBP13.47□□□□□ -0.25
VEGFA-219ENST00000518824 FECHP22830 423 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 MAN1A1P33908 653 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 MAGEA1P43355 309 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 ZNF135P52742 658 aaPredicted RBP13.47□□□□□ -0.25
VEGFA-219ENST00000518824 TEAD4Q15561 434 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 HADHQ16836 314 aaKnown RBP13.47□□□□□ -0.25
VEGFA-219ENST00000518824 ANKRD20A8PQ5CZ79 823 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 RAD9BQ6WBX8 426 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 SRLQ86TD4 932 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 LZTR1Q8N653 840 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 TMEM145Q8NBT3 493 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 KCTD6Q8NC69 237 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 CALN1Q9BXU9 219 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 TM7SF3Q9NS93 570 aa13.47□□□□□ -0.25
VEGFA-219ENST00000518824 REXO2Q9Y3B8 237 aaKnown RBP13.47□□□□□ -0.25
VEGFA-219ENST00000518824 A0A0U1RQJ8 604 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 C3orf70A6NLC5 250 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 TLR4O00206 839 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 AREL1O15033 823 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 LCA5LO95447 670 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 CER1O95813 267 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 PAK4O96013 591 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 ADRB1P08588 477 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 TNNT1P13805 278 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 KDELR1P24390 212 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 C21orf59P57076 290 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 NXPH1P58417 271 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 MAXP61244 160 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 GBE1Q04446 702 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 IHHQ14623 411 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 LBRQ14739 615 aaKnown RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 PAFAH1B3Q15102 231 aaKnown RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 ZNF423Q2M1K9 1284 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 SETMARQ53H47 684 aaPredicted RBP13.46□□□□□ -0.25
VEGFA-219ENST00000518824 NEK5Q6P3R8 708 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 GCNT7Q6ZNI0 430 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 TTC7BQ86TV6 843 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 GATAD2AQ86YP4 633 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 NAXDQ8IW45 347 aa13.46□□□□□ -0.25
VEGFA-219ENST00000518824 FAF2Q96CS3 445 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms