RNA–Protein interactions for RNA: ENST00000516768.1

SCARNA20-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20-201ENST00000516768 ZNF641Q96N77 438 aaPredicted RBP11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 KLHL32Q96NJ5 620 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 TUBGCP5Q96RT8 1024 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 GOLPH3Q9H4A6 298 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 PREBQ9HCU5 417 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 DLL3Q9NYJ7 618 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 DKK3Q9UBP4 350 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 SEPT3Q9UH03 358 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 SLCO1B1Q9Y6L6 691 aa11.3□□□□□ -0.6
SCARNA20-201ENST00000516768 ARHGAP33O14559 1287 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TM4SF5O14894 197 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 MUSKO15146 869 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 MATN3O15232 486 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 PSTPIP1O43586 416 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 AP1G1O43747 822 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 UGT2B4P06133 528 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 SYPP08247 313 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TNNT1P13805 278 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TIMP2P16035 220 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 ZFXP17010 805 aaPredicted RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 ENGP17813 658 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 NUDT1P36639 197 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 CDKN2BP42772 138 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 RGRP47804 291 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 CSNK1EP49674 416 aaKnown RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 SCNN1BP51168 640 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 AFF3P51826 1226 aaKnown RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 NAP1L1P55209 391 aaKnown RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 RACK1P63244 317 aaKnown RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 KIF5AQ12840 1032 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TAZQ16635 292 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 IFI16Q16666 785 aaKnown RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 RSPO4Q2I0M5 234 aaPredicted RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 ODF2Q5BJF6 829 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 MARC1Q5VT66 337 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 MFSD7Q6UXD7 560 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 KIAA1328Q86T90 577 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 PRPF39Q86UA1 669 aaKnown RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 LRRC8AQ8IWT6 810 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TXLNBQ8N3L3 684 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TEX26Q8N6G2 289 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 PLD5Q8N7P1 536 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 NETO1Q8TDF5 533 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 NSMCE1Q8WV22 266 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 SNX19Q92543 992 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 RAB7BQ96AH8 199 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 RMDN1Q96DB5 314 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 CINPQ9BW66 212 aaPredicted RBP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 SUV39H2Q9H5I1 410 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 GRPEL1Q9HAV7 217 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 TM9SF3Q9HD45 589 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 DTLQ9NZJ0 730 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 SBDSQ9Y3A5 250 aaKnown RBP eCLIP11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 PCDHA3Q9Y5H8 950 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 FADS3Q9Y5Q0 445 aa11.29□□□□□ -0.6
SCARNA20-201ENST00000516768 KNL1Q8NG31 2342 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 GOLGA6L3A6NEY3 463 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 SLC30A4O14863 429 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 TSPAN6O43657 245 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 MFSD11O43934 449 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 RNGTTO60942 597 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 PCDH8O95206 1070 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 KRT1P04264 644 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 CR2P20023 1033 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 MX2P20592 715 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 HSPA9P38646 679 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ID4P47928 161 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 PPP2CBP62714 309 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 PPP2CAP67775 309 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 GBE1Q04446 702 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 PUM1Q14671 1186 aaKnown RBP eCLIP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ZNF284Q2VY69 593 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 STPG1Q5TH74 334 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 TIGD7Q6NT04 549 aaPredicted RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 PARS2Q7L3T8 475 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 HORMAD1Q86X24 394 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 CAMK1DQ8IU85 385 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 KATNAL2Q8IYT4 538 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 BBS5Q8N3I7 341 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 PGBD5Q8N414 524 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ZCCHC9Q8N567 271 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ATPAF2Q8N5M1 289 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 RNF10Q8N5U6 811 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 LRRC57Q8N9N7 239 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 MAML1Q92585 1016 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 EXOC2Q96KP1 924 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 NSMCE3Q96MG7 304 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 DESI2Q9BSY9 194 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ZDHHC5Q9C0B5 715 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 FSCN3Q9NQT6 498 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ZFR2Q9UPR6 939 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 DMTF1Q9Y222 760 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 ADGRG1Q9Y653 693 aa11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 TNRC6BQ9UPQ9 1833 aaKnown RBP11.28□□□□□ -0.6
SCARNA20-201ENST00000516768 LAMA1P25391 3075 aa11.27□□□□□ -0.6
SCARNA20-201ENST00000516768 A0A0U1RQJ8 604 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 A0A1W2PQU0 124 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 TRAFD1O14545 582 aaPredicted RBP11.27□□□□□ -0.61
SCARNA20-201ENST00000516768 APOL1O14791 398 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms