RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 MORC2Q9Y6X9 1032 aaPredicted RBP4.1□□□□□ -1.75
LINC01088-211ENST00000515597 IGLV5-52A0A0A0MRZ9 124 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 hCG_1642624A0A1W2PR95 340 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 BUB3O43684 328 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 ITM2AO43736 263 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 KCNJ13O60928 360 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 CBX6O95503 412 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 AARSP49588 968 aaKnown RBP eCLIP4.09□□□□□ -1.755e-7■■■■■ 34.9
LINC01088-211ENST00000515597 BNC1Q01954 994 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 C10orf62Q5T681 223 aaPredicted RBP4.09□□□□□ -1.75
LINC01088-211ENST00000515597 WBP2NLQ6ICG8 309 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 LINS1Q8NG48 757 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 RUBCNQ92622 972 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 MASTLQ96GX5 879 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 NODALQ96S42 347 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 PKP4Q99569 1192 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 SLC25A33Q9BSK2 321 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 MSTO1Q9BUK6 570 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 IL25Q9H293 177 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 CLK4Q9HAZ1 481 aaKnown RBP4.09□□□□□ -1.75
LINC01088-211ENST00000515597 WDR6Q9NNW5 1121 aaKnown RBP4.09□□□□□ -1.75
LINC01088-211ENST00000515597 TCF7L2Q9NQB0 619 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 TLR8Q9NR97 1041 aaKnown RBP4.09□□□□□ -1.75
LINC01088-211ENST00000515597 KIF17Q9P2E2 1029 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 NLKQ9UBE8 527 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 ARAP1Q96P48 1450 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 SMARCA2P51531 1590 aa4.09□□□□□ -1.75
LINC01088-211ENST00000515597 HBP1O60381 514 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 SERPINI2O75830 405 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 SNRNP70P08621 437 aaKnown RBP4.08□□□□□ -1.76
LINC01088-211ENST00000515597 CKMT1AP12532 417 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 NCAPD3P42695 1498 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 PTPN9P43378 593 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 MXI1P50539 228 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 TUBA1BP68363 451 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 FAM27E3Q08E93 113 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 CTTNQ14247 550 aaKnown RBP4.08□□□□□ -1.76
LINC01088-211ENST00000515597 KIF19Q2TAC6 998 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 CBWD5Q5RIA9 395 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 SH2D4BQ5SQS7 431 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 KRTAP5-1Q6L8H4 278 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 MEX3BQ6ZN04 569 aaKnown RBP4.08□□□□□ -1.76
LINC01088-211ENST00000515597 KIF21AQ7Z4S6 1674 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 TCP11L2Q8N4U5 519 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 MCPH1Q8NEM0 835 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 ZMIZ2Q8NF64 920 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 GPT2Q8TD30 523 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 ATOH1Q92858 354 aaPredicted RBP4.08□□□□□ -1.76
LINC01088-211ENST00000515597 IGSF21Q96ID5 467 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 PAGR1Q9BTK6 254 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 CTDSP1Q9GZU7 261 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 MVB12BQ9H7P6 319 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 CHODLQ9H9P2 273 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 DERAQ9Y315 318 aa4.08□□□□□ -1.76
LINC01088-211ENST00000515597 CHL1O00533 1208 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 DHX16O60231 1041 aaKnown RBP4.07□□□□□ -1.76
LINC01088-211ENST00000515597 SERPINC1P01008 464 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 CGAP01215 116 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 IL1AP01583 271 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 IGLV2-11P01706 119 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 CTPS1P17812 591 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 C21orf33P30042 268 aaPredicted RBP4.07□□□□□ -1.76
LINC01088-211ENST00000515597 HNF1BP35680 557 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 CHKAP35790 457 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 CENPAP49450 140 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 ACTR2P61160 394 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 SLC18A2Q05940 514 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 PRKG1Q13976 671 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 POSTNQ15063 836 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 ZRSR1Q15695 479 aaKnown RBP4.07□□□□□ -1.76
LINC01088-211ENST00000515597 ME3Q16798 604 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 MRGPRG-AS1Q2M3A8 158 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 CTXN3Q4LDR2 81 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 DCAF6Q58WW2 860 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 DENND1BQ6P3S1 775 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 SPPL3Q8TCT6 385 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 TBC1D22AQ8WUA7 517 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 RNFT2Q96EX2 444 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 RBM17Q96I25 401 aaKnown RBP4.07□□□□□ -1.76
LINC01088-211ENST00000515597 DUX5Q96PT3 197 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 NPLQ9BXD5 320 aaPredicted RBP4.07□□□□□ -1.76
LINC01088-211ENST00000515597 SDF2L1Q9HCN8 221 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 DONSONQ9NYP3 566 aa4.07□□□□□ -1.76
LINC01088-211ENST00000515597 A0A0U1RQJ8 604 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 A0A1B0GVM2 712 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 KDM4EB2RXH2 506 aaPredicted RBP4.06□□□□□ -1.76
LINC01088-211ENST00000515597 STX16-NPEPL1H3BU86 382 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 STX16O14662 325 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 ADAP00813 363 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 DAOP14920 347 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 TRAPPC10P48553 1259 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 POU3F1Q03052 451 aaPredicted RBP4.06□□□□□ -1.76
LINC01088-211ENST00000515597 GOLGA8FQ08AF8 430 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 ST3GAL1Q11201 340 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 NAPEPLDQ6IQ20 393 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 RETSATQ6NUM9 610 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 MOGAT3Q86VF5 341 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 RFLNBQ8N5W9 214 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 MYCT1Q8N699 235 aa4.06□□□□□ -1.76
LINC01088-211ENST00000515597 LILRB1Q8NHL6 650 aaPredicted RBP4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms