RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 HS3ST3A1Q9Y663 406 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 ITPR1Q14643 2758 aa13.51□□□□□ -0.25
PFDN1-206ENST00000514611 A0A087WV48 116 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 LY6G6EA0A0G2JKS1 128 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 SPTY2D1-AS1A0A0U1RR47 76 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 LRRC10BA6NIK2 292 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 FPGTO14772 594 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 AREL1O15033 823 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 INSIG1O15503 277 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 TEX33O43247 280 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 TSPAN6O43657 245 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 TLX3O43711 291 aaPredicted RBP13.5□□□□□ -0.25
PFDN1-206ENST00000514611 NME1P15531 152 aaKnown RBP13.5□□□□□ -0.25
PFDN1-206ENST00000514611 ITIH2P19823 946 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 RABIFP47224 123 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 PDE1CQ14123 709 aaPredicted RBP13.5□□□□□ -0.25
PFDN1-206ENST00000514611 GDPD4Q6W3E5 623 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 MCOLN2Q8IZK6 566 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 RAB7BQ96AH8 199 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 IFT43Q96FT9 208 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 APOLD1Q96LR9 279 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 GDAP1L1Q96MZ0 367 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 EPAS1Q99814 870 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 SYT11Q9BT88 431 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 C1QTNF2Q9BXJ5 285 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 OSBPL1AQ9BXW6 950 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 TTYH3Q9C0H2 523 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 NLGN3Q9NZ94 848 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 AK5Q9Y6K8 562 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 U3KQA8 63 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 ZFYVE26Q68DK2 2539 aa13.5□□□□□ -0.25
PFDN1-206ENST00000514611 CHD5Q8TDI0 1954 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 ANKRD62A6NC57 917 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 ZSCAN5CA6NGD5 496 aaPredicted RBP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 TMCO5BA8MYB1 307 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 RASA4BC9J798 803 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 GOLGA6L22H0YM25 854 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 K7ESM1 405 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 RASA4O43374 803 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 PIGNO95427 931 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 POP4O95707 220 aaKnown RBP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 IGSF6O95976 241 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 CSF2P04141 144 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 ALPPL2P10696 532 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 CKMT1AP12532 417 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 FERP16591 822 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 IGFALSP35858 605 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 TPI1P60174 286 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 PFN3P60673 137 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 RHOAP61586 193 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 HNRNPKP61978 463 aaKnown RBP eCLIP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 SGCGQ13326 291 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 COL9A2Q14055 689 aaPredicted RBP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 ACAD10Q6JQN1 1059 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 DCUN1D2Q6PH85 259 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 VPS36Q86VN1 386 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 ZSCAN30Q86W11 494 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 RBFAQ8N0V3 343 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 DCBLD1Q8N8Z6 715 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 DENND6BQ8NEG7 585 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 FAM174AQ8TBP5 190 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 LENG8Q96PV6 779 aaPredicted RBP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 CNPY3Q9BT09 278 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 WRAP53Q9BUR4 548 aaKnown RBP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 NRSN2Q9GZP1 204 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 CATSPERBQ9H7T0 1116 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 TMEM63CQ9P1W3 806 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 LHX3Q9UBR4 397 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 PNMA8BQ9ULN7 279 aaPredicted RBP13.49□□□□□ -0.25
PFDN1-206ENST00000514611 PCDHB1Q9Y5F3 818 aa13.49□□□□□ -0.25
PFDN1-206ENST00000514611 APC2O95996 2303 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 CACNA1GO43497 2377 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 LRRC53A6NM62 1247 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 WASH4PA8MWX3 477 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 H3BM21 787 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 SCAMP1O15126 338 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 BRINP1O60477 761 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 MMP20O60882 483 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 MBD3O95983 291 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 MT-CO3P00414 261 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 ITPKBP27987 946 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 AIF1P55008 147 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 EIF2B5Q13144 721 aaKnown RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 SERINC3Q13530 473 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 RTP5Q14D33 572 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 CYTH1Q15438 398 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 CA9Q16790 459 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 PARP15Q460N3 678 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 ANO6Q4KMQ2 910 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 E4F1Q66K89 784 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 TTC7BQ86TV6 843 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 DCP2Q8IU60 420 aaKnown RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 CENPTQ96BT3 561 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 ARHGEF26Q96DR7 871 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 CELF6Q96J87 481 aaKnown RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 PEBP4Q96S96 227 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 TRIM7Q9C029 511 aa13.48□□□□□ -0.25
PFDN1-206ENST00000514611 TCEAL2Q9H3H9 227 aaPredicted RBP13.48□□□□□ -0.25
PFDN1-206ENST00000514611 PDFQ9HBH1 243 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms