RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 CSNK1DP48730 415 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 PEX5P50542 639 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 SCNN1BP51168 640 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 RENBPP51606 427 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 TAS2R38P59533 333 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 NSUN2Q08J23 767 aaKnown RBP eCLIP14.13□□□□□ -0.15
USP46-209ENST00000514536 TFDP2Q14188 446 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 ZNF235Q14590 738 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 SF3A2Q15428 464 aaKnown RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 CSRP2Q16527 193 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 ZNF805Q5CZA5 627 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 TFDP3Q5H9I0 405 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 PIP5KL1Q5T9C9 394 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 MARC1Q5VT66 337 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 FBXL19Q6PCT2 694 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 PARS2Q7L3T8 475 aaKnown RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 PGBD5Q8N414 524 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 DNASE2BQ8WZ79 361 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 RBM41Q96IZ5 413 aaKnown RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 ZNF830Q96NB3 372 aaPredicted RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 TSGA13Q96PP4 275 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 PSKH2Q96QS6 385 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 OSBPL1AQ9BXW6 950 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 CPEB1Q9BZB8 566 aaKnown RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 MIR1-1HGQ9H1L0 117 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 LZTFL1Q9NQ48 299 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 VPS45Q9NRW7 570 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 EIF2B4Q9UI10 523 aaKnown RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 PACSIN2Q9UNF0 486 aaPredicted RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 NUMA1Q14980 2115 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 hCG_1818297A0A087WSY0 165 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 C16orf96A6NNT2 1141 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 PATE3B3GLJ2 98 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 MATN3O15232 486 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 GJB3O75712 270 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 PIGNO95427 931 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 DPP6P42658 865 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 MMP13P45452 471 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 NEK3P51956 506 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 RWDD2BP57060 319 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 ADCY2Q08462 1091 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 TCEAL6Q6IPX3 200 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 TIGD7Q6NT04 549 aaPredicted RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 BBS5Q8N3I7 341 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 GPR161Q8N6U8 529 aaKnown RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 ALG3Q92685 438 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 TCEAL3Q969E4 200 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 LGMNQ99538 433 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 HEMGNQ9BXL5 484 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 KDM4CQ9H3R0 1056 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 SAE1Q9UBE0 346 aaPredicted RBP14.13□□□□□ -0.15
USP46-209ENST00000514536 GON4LQ3T8J9 2241 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 SPAG17Q6Q759 2223 aa14.13□□□□□ -0.15
USP46-209ENST00000514536 ZNF292O60281 2723 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 PLXND1Q9Y4D7 1925 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 NYNRINQ9P2P1 1898 aaKnown RBP14.12□□□□□ -0.15
USP46-209ENST00000514536 IGHV4-34P06331 123 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 ADRB3P13945 408 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 MAXP61244 160 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 PPP2CBP62714 309 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 PPP2CAP67775 309 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 HNRNPDQ14103 355 aaKnown RBP14.12□□□□□ -0.15
USP46-209ENST00000514536 GRM3Q14832 879 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 PDK1Q15118 436 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 DUOXA1Q1HG43 343 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 PEAR1Q5VY43 1037 aaPredicted RBP14.12□□□□□ -0.15
USP46-209ENST00000514536 PRR23CQ6ZRP0 262 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 TTC7BQ86TV6 843 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 CAMK1DQ8IU85 385 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 CCDC13Q8IYE1 715 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 TEX26Q8N6G2 289 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 HDAC11Q96DB2 347 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 NSMCE3Q96MG7 304 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 SUV39H2Q9H5I1 410 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 NT5MQ9NPB1 228 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 PPP2R2CQ9Y2T4 447 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.12□□□□□ -0.15
USP46-209ENST00000514536 FRYLO94915 3013 aa14.12□□□□□ -0.15
USP46-209ENST00000514536 KHNYNO15037 678 aaKnown RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 RNGTTO60942 597 aaKnown RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 PCDH8O95206 1070 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 CFIP05156 583 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 PYGMP11217 842 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 CCNB1P14635 433 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 GNSP15586 552 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 TIMP2P16035 220 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 MAT2AP31153 395 aaKnown RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 HOXD12P35452 270 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 HSPA9P38646 679 aaKnown RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 CCR5P51681 352 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 COPS2P61201 443 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 IRX4P78413 519 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 PPIDQ08752 370 aaKnown RBP14.11□□□□□ -0.15
USP46-209ENST00000514536 ITKQ08881 620 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 AP1B1Q10567 949 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 PPP2R5EQ16537 467 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 TRIM61Q5EBN2 209 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 AADACL2Q6P093 401 aa14.11□□□□□ -0.15
USP46-209ENST00000514536 ZNF662Q6ZS27 426 aa14.11□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms