RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 AFMIDQ63HM1 303 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 CCDC137Q6PK04 289 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 USP30Q70CQ3 517 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 LPCAT2Q7L5N7 544 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 DSG4Q86SJ6 1040 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 MMAAQ8IVH4 418 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 PCDH20Q8N6Y1 951 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 TMIEQ8NEW7 156 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 MAGOHBQ96A72 148 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 HMCESQ96FZ2 354 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 CSPG4P5Q96PW8 444 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 HERPUD2Q9BSE4 406 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 FRMD8P1Q9BZ68 369 aaPredicted RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 KLC2Q9H0B6 622 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 PABPC3Q9H361 631 aaKnown RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 FBXL12Q9NXK8 326 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 GRHL1Q9NZI5 618 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 FAM153AQ9UHL3 310 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 MBD1Q9UIS9 605 aaPredicted RBP8.46□□□□□ -1.06
CCL28-204ENST00000514421 GMEB2Q9UKD1 530 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 PPM1HQ9ULR3 514 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 KNL1Q8NG31 2342 aa8.46□□□□□ -1.06
CCL28-204ENST00000514421 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ESYT3A0FGR9 886 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ZNF487B1APH4 448 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 TP73O15350 636 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 BNIP3LO60238 219 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 PPFIA2O75334 1257 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 POP4O95707 220 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 ADH1BP00325 375 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 IL1BP01584 269 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 CD48P09326 243 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 VAV1P15498 845 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 IVDP26440 423 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 SERPINB6P35237 376 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 GJC1P36383 396 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 CDKN2BP42772 138 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 DHPSP49366 369 aaPredicted RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 SERPINH1P50454 418 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 SNRPD1P62314 119 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 MRPS25P82663 173 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 CBX1P83916 185 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 RPL6Q02878 288 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 CCDC15Q0P6D6 951 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 DPYSL3Q14195 570 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 CST6Q15828 149 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 MYLK3Q32MK0 819 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ODF2Q5BJF6 829 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ANKRD20A8PQ5CZ79 823 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 TFDP3Q5H9I0 405 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 PMS2CLQ68D20 193 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ZDHHC24Q6UX98 284 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 LRIG3Q6UXM1 1119 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 Q6ZVU0 165 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 TMC3Q7Z5M5 1100 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 LRRC49Q8IUZ0 686 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ARHGAP12Q8IWW6 846 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 GSPT2Q8IYD1 628 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 TMEFF1Q8IYR6 380 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 HDDC3Q8N4P3 179 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 DCLK2Q8N568 766 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 TSEN2Q8NCE0 465 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 CADM4Q8NFZ8 388 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 OR2A12Q8NGT7 310 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 GANCQ8TET4 914 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 RAPGEF5Q92565 580 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 TOE1Q96GM8 510 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 ZNF419Q96HQ0 510 aaPredicted RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 CELF6Q96J87 481 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 OMDQ99983 421 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 HEPHQ9BQS7 1158 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 CALN1Q9BXU9 219 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 MAK16Q9BXY0 300 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 OSBPL8Q9BZF1 889 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 BTBD1Q9H0C5 482 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 SGK2Q9HBY8 427 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ETNK2Q9NVF9 386 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 WHRNQ9P202 907 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 NCDNQ9UBB6 729 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 HECAQ9UBI9 543 aaPredicted RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 UBA2Q9UBT2 640 aaPredicted RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 IPO11Q9UI26 975 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 FCF1Q9Y324 198 aaKnown RBP8.45□□□□□ -1.06
CCL28-204ENST00000514421 PCDHGA5Q9Y5G8 931 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 ACTL7AQ9Y615 435 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 GVINP1Q7Z2Y8 2422 aa8.45□□□□□ -1.06
CCL28-204ENST00000514421 NUP205Q92621 2012 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 hCG_1818297A0A087WSY0 165 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 BCLAF3A2AJT9 711 aaKnown RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 GOLGA6BA6NDN3 693 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 METTL12A8MUP2 240 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 C1QTNF3-AMACRE9PGA6 284 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 J3KR12 359 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 DFFAO00273 331 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 MID1O15344 667 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 PRAMEF11O60813 436 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 LRP3O75074 770 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 RNASEH2AO75792 299 aaKnown RBP8.44□□□□□ -1.06
CCL28-204ENST00000514421 TJP3O95049 919 aa8.44□□□□□ -1.06
CCL28-204ENST00000514421 EPN2O95208 641 aa8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms