RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 AREL1O15033 823 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 RRP8O43159 456 aaKnown RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 KDELR3O43731 214 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 POP4O95707 220 aaKnown RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 GPD1P21695 349 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 STAT1P42224 750 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 NSFP46459 744 aaKnown RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 GSCP56915 257 aaPredicted RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 EIF2B5Q13144 721 aaKnown RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 PDE1CQ14123 709 aaPredicted RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 SYCP1Q15431 976 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 LRRC73Q5JTD7 316 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 FKBP15Q5T1M5 1219 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 ZSCAN30Q86W11 494 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 PHF13Q86YI8 300 aaPredicted RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 C3orf20Q8ND61 904 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 DUSP23Q9BVJ7 150 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 SELENOOQ9BVL4 669 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 KLC2Q9H0B6 622 aa12.39□□□□□ -0.43
SNHG4-208ENST00000514110 IPO11Q9UI26 975 aaKnown RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 PNMA8BQ9ULN7 279 aaPredicted RBP12.39□□□□□ -0.43
SNHG4-208ENST00000514110 TCRBV5S1A1TA0A578 114 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 SIGLEC16A6NMB1 481 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 H3BM21 787 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 CCP110O43303 1012 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 AQP9O43315 295 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 BUB1O43683 1085 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 TMCC1O94876 653 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 GP1BAP07359 652 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 TPM2P07951 284 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 JUNDP17535 347 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 ITIH2P19823 946 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 ACTN2P35609 894 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 IGFALSP35858 605 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 DUSP3P51452 185 aaPredicted RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 COPB1P53618 953 aaKnown RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 PFN3P60673 137 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 CCDC173Q0VFZ6 552 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 TBC1D25Q3MII6 688 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 ZCCHC8Q6NZY4 707 aaKnown RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 GDPD4Q6W3E5 623 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 RBM43Q6ZSC3 357 aaKnown RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 MON1BQ7L1V2 547 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 SLFN11Q7Z7L1 901 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 VPS36Q86VN1 386 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 ZNF354CQ86Y25 554 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 RBFAQ8N0V3 343 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 RTL3Q8N8U3 475 aaKnown RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 DENND6BQ8NEG7 585 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 IFI44Q8TCB0 444 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 ASB12Q8WXK4 309 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 BAP1Q92560 729 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 CENPTQ96BT3 561 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 HMCESQ96FZ2 354 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 OSBPL1AQ9BXW6 950 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 TTYH3Q9C0H2 523 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 TCEAL2Q9H3H9 227 aaPredicted RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 USP29Q9HBJ7 922 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 DAAM1Q9Y4D1 1078 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 CSNK1G3Q9Y6M4 447 aa12.38□□□□□ -0.43
SNHG4-208ENST00000514110 COL27A1Q8IZC6 1860 aaPredicted RBP12.38□□□□□ -0.43
SNHG4-208ENST00000514110 MMP20O60882 483 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 USP12O75317 370 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 CSO75390 466 aaKnown RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 GCATO75600 419 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 MPOP05164 745 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 CALB1P05937 261 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 TGM2P21980 687 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 EPHB2P29323 1055 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 RPL7AP62424 266 aaKnown RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 CDKN3Q16667 212 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 DEFB133Q30KQ1 61 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 SCYL2Q6P3W7 929 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 GUSBP11Q6P575 273 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 CLEC17AQ6ZS10 378 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 TTC7BQ86TV6 843 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 SPACA3Q8IXA5 215 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 NEK11Q8NG66 645 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 LMX1AQ8TE12 382 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 PCMTD1Q96MG8 357 aaPredicted RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 GDAP1L1Q96MZ0 367 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 FCRL3Q96P31 734 aaPredicted RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 DEPDC7Q96QD5 511 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 UBL7Q96S82 380 aaPredicted RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 ABCG4Q9H172 646 aa12.37□□□□□ -0.43
SNHG4-208ENST00000514110 MBNL1Q9NR56 388 aaKnown RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 SEPT11Q9NVA2 429 aaKnown RBP12.37□□□□□ -0.43
SNHG4-208ENST00000514110 FASNP49327 2511 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 CPED1A4D0V7 1026 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 ZSCAN5CA6NGD5 496 aaPredicted RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 EIF4E1BA6NMX2 242 aaKnown RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 LGALS16A8MUM7 142 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 RASA4BC9J798 803 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 INSIG1O15503 277 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 RASA4O43374 803 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 CREB3O43889 395 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 PRB1P04280 392 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 TIMP2P16035 220 aa12.36□□□□□ -0.43
SNHG4-208ENST00000514110 ZNF143P52747 638 aaPredicted RBP12.36□□□□□ -0.43
SNHG4-208ENST00000514110 GABREP78334 506 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms