RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 TTC24A2A3L6 582 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 PLIN3O60664 434 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 FSBPO95073 299 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 GSRP00390 522 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 EPOP01588 193 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 MPOP05164 745 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 GSTA1P08263 222 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 NEFHP12036 1026 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 HLA-DPA1P20036 260 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CA8P35219 290 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 FPGSQ05932 587 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CNGA3Q16281 694 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 TSTD2Q5T7W7 516 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 TXNDC8Q6A555 127 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 GAREM2Q75VX8 874 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 FAM217AQ8IXS0 508 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 ARL14EPQ8N8R7 260 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 ATXN7L3BQ96GX2 97 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 ZBED2Q9BTP6 218 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 MECRQ9BV79 373 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CXXC1Q9P0U4 656 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 IRAK3Q9Y616 596 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 USH1CQ9Y6N9 552 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 MROH6A6NGR9 719 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 TSPAN3O60637 253 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 TGDSO95455 350 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CXCL14O95715 111 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 LRG1P02750 347 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 PRKCGP05129 697 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 SERPINF2P08697 491 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 F7P08709 466 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 TROVE2P10155 538 aaKnown RBP eCLIP15.1■□□□□ 0.01
VCAN-211ENST00000513984 HDCP19113 662 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 GABRR2P28476 465 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 ZXDBP98169 803 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CCDC15Q0P6D6 951 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 PPM1JQ5JR12 505 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 ATG16L1Q676U5 607 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CLEC14AQ86T13 490 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 NUDCD3Q8IVD9 361 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 GBP7Q8N8V2 638 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 HJURPQ8NCD3 748 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 BADQ92934 168 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 E2F7Q96AV8 911 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 FAM167BQ9BTA0 163 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 SPON2Q9BUD6 331 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 CINPQ9BW66 212 aaPredicted RBP15.1■□□□□ 0.01
VCAN-211ENST00000513984 CPQQ9Y646 472 aa15.1■□□□□ 0.01
VCAN-211ENST00000513984 GJB3O75712 270 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 C1RP00736 705 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 AHSGP02765 367 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 PROCP04070 461 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 FGF1P05230 155 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 CR2P20023 1033 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 GLDCP23378 1020 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 GABRB3P28472 473 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 ABCG1P45844 678 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 POLD2P49005 469 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 CDK18Q07002 472 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 ACTN3Q08043 901 aaPredicted RBP15.09■□□□□ 0.01
VCAN-211ENST00000513984 GRM3Q14832 879 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 TMEM240Q5SV17 173 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 NLRP9Q7RTR0 991 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 TMC7Q7Z402 723 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 C2CD4AQ8NCU7 369 aaPredicted RBP15.09■□□□□ 0.01
VCAN-211ENST00000513984 MRPS31Q92665 395 aaKnown RBP15.09■□□□□ 0.01
VCAN-211ENST00000513984 C7orf26Q96N11 449 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 PRKAG2Q9UGJ0 569 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 GGT7Q9UJ14 662 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 SLC12A4Q9UP95 1085 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 LZTS1Q9Y250 596 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 ACTL7AQ9Y615 435 aa15.09■□□□□ 0.01
VCAN-211ENST00000513984 A0A096LPK6 155 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 C8AP07357 584 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 SLC1A2P43004 574 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 NUMBP49757 651 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 SLC7A9P82251 487 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 CYP4F8P98187 520 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 BST1Q10588 318 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 THOC5Q13769 683 aaKnown RBP15.08■□□□□ 0.01
VCAN-211ENST00000513984 CHI3L2Q15782 390 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 CCDC153Q494R4 210 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 GALNTL6Q49A17 601 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 RNF219Q5W0B1 726 aaPredicted RBP15.08■□□□□ 0.01
VCAN-211ENST00000513984 C16orf46Q6P387 395 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 PSRC1Q6PGN9 363 aaPredicted RBP15.08■□□□□ 0.01
VCAN-211ENST00000513984 KIAA0408Q6ZU52 694 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 DENND6AQ8IWF6 608 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 KREMEN2Q8NCW0 462 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 OR13J1Q8NGT2 312 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 CALML6Q8TD86 181 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 PEX13Q92968 403 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 IFT43Q96FT9 208 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 THOC1Q96FV9 657 aaKnown RBP15.08■□□□□ 0.01
VCAN-211ENST00000513984 TRIB3Q96RU7 358 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 RAD9AQ99638 391 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 NPHS2Q9NP85 383 aa15.08■□□□□ 0.01
VCAN-211ENST00000513984 GBF1Q92538 1859 aa15.08■□□□□ 0
VCAN-211ENST00000513984 TBL1XO60907 577 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms