RNA–Protein interactions for RNA: ENST00000512909.1

HTT-210, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 611 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-210ENST00000512909 FNDC1Q4ZHG4 1894 aaPredicted RBP4.53□□□□□ -1.68
HTT-210ENST00000512909 POLR2AP24928 1970 aaKnown RBP4.53□□□□□ -1.68
HTT-210ENST00000512909 ABCC6O95255 1503 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 AOX1Q06278 1338 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 A0A1B0GVC2 190 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 TCRBV7S3A2A0A539 114 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 SLC22A23A1A5C7 686 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 OR6C68A6NDL8 312 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 CXorf65A6NEN9 183 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 KCNU1A8MYU2 1149 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 RRHO14718 337 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 TNPO2O14787 897 aaKnown RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 ZC3H11AO75152 810 aaKnown RBP eCLIP4.52□□□□□ -1.69
HTT-210ENST00000512909 MBD4O95243 580 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 CYP21A2P08686 494 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 CYP19A1P11511 503 aaPredicted RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 EIF2S2P20042 333 aaKnown RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 IDUAP35475 653 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ARL1P40616 181 aaPredicted RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 MMP13P45452 471 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 LMOD3Q0VAK6 560 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 TDGQ13569 410 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 CAMK1Q14012 370 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 FAM69AQ5T7M9 428 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ISM2Q6H9L7 571 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 KRTAP5-3Q6L8H2 238 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ZNF790Q6PG37 636 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ZNF782Q6ZMW2 699 aaPredicted RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 TFAP2DQ7Z6R9 452 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ANKRD13BQ86YJ7 626 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 TMTC1Q8IUR5 882 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ARMC8Q8IUR7 673 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 GALNT16Q8N428 558 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 PAQR4Q8N4S7 273 aaPredicted RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 TSPYL6Q8N831 410 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 ZCCHC10Q8TBK6 192 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 HSPH1Q92598 858 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 HDAC2Q92769 488 aaKnown RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 ZNF622Q969S3 477 aaKnown RBP eCLIP4.52□□□□□ -1.69
HTT-210ENST00000512909 RNF125Q96EQ8 232 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 APOPT1Q96IL0 206 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 THUMPD2Q9BTF0 503 aaKnown RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 TM2D2Q9BX73 214 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 PAIP1Q9H074 479 aaKnown RBP4.52□□□□□ -1.69
HTT-210ENST00000512909 PDGFCQ9NRA1 345 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 PPP1R14DQ9NXH3 145 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 USP16Q9Y5T5 823 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 COX11Q9Y6N1 276 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 PEAK1Q9H792 1746 aa4.52□□□□□ -1.69
HTT-210ENST00000512909 KIF20BQ96Q89 1820 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 RGPD2P0DJD1 1756 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 C16orf96A6NNT2 1141 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 DHX16O60231 1041 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 SERPINB2P05120 415 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 NHLRC4P0CG21 123 aaPredicted RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 FCGR2AP12318 317 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 MYL6BP14649 208 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 DPEP1P16444 411 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 EPHB2P29323 1055 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 HOXA7P31268 230 aaPredicted RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 HNF1BP35680 557 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 SOX2P48431 317 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 NAP1L1P55209 391 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 GAD2Q05329 585 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 SRSF4Q08170 494 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 GALNT2Q10471 571 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 SMN1Q16637 294 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 TTC39AQ5SRH9 613 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 SLC18B1Q6NT16 456 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 ZNF474Q6S9Z5 364 aaPredicted RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 IL20RBQ6UXL0 311 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 MDGA2Q7Z553 956 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 YTHDF3Q7Z739 585 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 PCYOX1LQ8NBM8 494 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 FAM110DQ8TAY7 271 aaPredicted RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 TBC1D22AQ8WUA7 517 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 UCMAQ8WVF2 138 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 ATP2A3Q93084 1043 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 ZUFSPQ96AP4 578 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 EVI5LQ96CN4 794 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 RRP36Q96EU6 259 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 P2RY11Q96G91 374 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 TEFMQ96QE5 360 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 HERC2P3Q9BVR0 1158 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 ACTR5Q9H9F9 607 aaPredicted RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 MOV10Q9HCE1 1003 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 PAPOLBQ9NRJ5 636 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 TMEM160Q9NX00 188 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 UTS2RQ9UKP6 389 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 MAP3K5Q99683 1374 aa4.51□□□□□ -1.69
HTT-210ENST00000512909 MAP2P11137 1827 aaKnown RBP4.51□□□□□ -1.69
HTT-210ENST00000512909 TNS1Q9HBL0 1735 aaKnown RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 CYP2D7A0A087X1C5 515 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 C2CD4BA6NLJ0 364 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 KCNJ18B7U540 433 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 H0YIN7 160 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 EYA2O00167 538 aa4.5□□□□□ -1.69
HTT-210ENST00000512909 HTATSF1O43719 755 aaKnown RBP4.5□□□□□ -1.69
HTT-210ENST00000512909 HSPA1AP0DMV8 641 aaKnown RBP4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms