RNA–Protein interactions for RNA: ENST00000512418.5

CCHCR1-229, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 565 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-229ENST00000512418 ZNF548Q8NEK5 533 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 SNIP1Q8TAD8 396 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 CASKIN2Q8WXE0 1202 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 BAP1Q92560 729 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 APOLD1Q96LR9 279 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 GDAP1L1Q96MZ0 367 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 KLF6Q99612 283 aaPredicted RBP14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 MAGEB5Q9BZ81 275 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 CAAP1Q9H8G2 361 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 LIMA1Q9UHB6 759 aaKnown RBP14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 ITM2BQ9Y287 266 aa14.93□□□□□ -0.02
CCHCR1-229ENST00000512418 ANKRD62A6NC57 917 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 K7ESM1 405 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 AREL1O15033 823 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 RRP8O43159 456 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 BRINP1O60477 761 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 TMCC1O94876 653 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 EPHB2P29323 1055 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 DUSP3P51452 185 aaPredicted RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 C1QBPQ07021 282 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 PDE1CQ14123 709 aaPredicted RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 MYLK3Q32MK0 819 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 ATXN7L2Q5T6C5 722 aaPredicted RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 DNAJC24Q6P3W2 148 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 GDPD4Q6W3E5 623 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 KDM7AQ6ZMT4 941 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 ZNF354CQ86Y25 554 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 RTL3Q8N8U3 475 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 VOPP1Q96AW1 172 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 CRELD1Q96HD1 420 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 KLHL32Q96NJ5 620 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 EPAS1Q99814 870 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 SEPT11Q9NVA2 429 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 IPO11Q9UI26 975 aaKnown RBP14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 GGT7Q9UJ14 662 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 CSNK1G3Q9Y6M4 447 aa14.92□□□□□ -0.02
CCHCR1-229ENST00000512418 FASNP49327 2511 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 LY6G6EA0A0G2JKS1 128 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 TCRBV5S1A1TA0A578 114 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 RIOK3O14730 519 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 SPINT1O43278 529 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 CCP110O43303 1012 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 BUB1O43683 1085 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 OPA1O60313 960 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 NEBLO76041 1014 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 IGSF6O95976 241 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 ZNF143P52747 638 aaPredicted RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 AIF1P55008 147 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 YBEYP58557 167 aaPredicted RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 PFN3P60673 137 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 UBXN1Q04323 297 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 RAD51Q06609 339 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 STX1AQ16623 288 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 INO80DQ53TQ3 878 aaPredicted RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 CDCP2Q5VXM1 449 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 ZCCHC8Q6NZY4 707 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 SCYL2Q6P3W7 929 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 SASS6Q6UVJ0 657 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 TTC7BQ86TV6 843 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 PYROXD2Q8N2H3 581 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 FGF11Q92914 225 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 MCEEQ96PE7 176 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 DEPDC7Q96QD5 511 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 ERGIC2Q96RQ1 377 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 TTYH3Q9C0H2 523 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 NOL6Q9H6R4 1146 aaKnown RBP14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 ANO10Q9NW15 660 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 NCKIPSDQ9NZQ3 722 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 MFHAS1Q9Y4C4 1052 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 U3KQA8 63 aa14.91□□□□□ -0.02
CCHCR1-229ENST00000512418 LRRC10BA6NIK2 292 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 WASH4PA8MWX3 477 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 AQP9O43315 295 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 CREB3O43889 395 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 JUNDP17535 347 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 DESP17661 470 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 ITPKBP27987 946 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 ACTN2P35609 894 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 RHOAP61586 193 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 PTK2BQ14289 1009 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 TBC1D25Q3MII6 688 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 PARP15Q460N3 678 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 PPP1R15BQ5SWA1 713 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 TPRG1LQ5T0D9 272 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 BTN2A2Q8WVV5 523 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 CENPTQ96BT3 561 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 GBP4Q96PP9 640 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 AGPAT1Q99943 283 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 CNPY3Q9BT09 278 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 C1QTNF7Q9BXJ2 289 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 ABCG4Q9H172 646 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 CATSPERBQ9H7T0 1116 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 KLF15Q9UIH9 416 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 FZD10Q9ULW2 581 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 PCDHB1Q9Y5F3 818 aa14.9□□□□□ -0.02
CCHCR1-229ENST00000512418 RASA4BC9J798 803 aa14.89□□□□□ -0.03
CCHCR1-229ENST00000512418 TOR1BO14657 336 aa14.89□□□□□ -0.03
CCHCR1-229ENST00000512418 TPP1O14773 563 aa14.89□□□□□ -0.03
CCHCR1-229ENST00000512418 FGF10O15520 208 aaPredicted RBP14.89□□□□□ -0.03
CCHCR1-229ENST00000512418 RASA4O43374 803 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms