RNA–Protein interactions for RNA: ENST00000511892.5

RNF4-217, Transcript of ring finger protein 4, humanhuman

TSL 4

Gene RNF4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-217ENST00000511892 ZNHIT6Q9NWK9 470 aaKnown RBP5.94□□□□□ -1.46
RNF4-217ENST00000511892 IL36AQ9UHA7 158 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 DNAI1Q9UI46 699 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 CAPN11Q9UMQ6 739 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 CA5BQ9Y2D0 317 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 LUC7L2Q9Y383 392 aaKnown RBP5.94□□□□□ -1.46
RNF4-217ENST00000511892 MSRB2Q9Y3D2 182 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 NEUROG3Q9Y4Z2 214 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 PCDHB9Q9Y5E1 797 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 WASF2Q9Y6W5 498 aa5.94□□□□□ -1.46
RNF4-217ENST00000511892 COL27A1Q8IZC6 1860 aaPredicted RBP5.94□□□□□ -1.46
RNF4-217ENST00000511892 URB1O60287 2271 aaKnown RBP5.94□□□□□ -1.46
RNF4-217ENST00000511892 KIF26BQ2KJY2 2108 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 A0A1W2PQU0 124 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 TLR4O00206 839 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 KPNA3O00505 521 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 FLRT2O43155 660 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 WIPF1O43516 503 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 RNGTTO60942 597 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 LEFTY1O75610 366 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 TRIM16O95361 564 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CAPNS1P04632 268 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 GYPCP04921 128 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CCDC175P0C221 793 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 HNRNPH3P31942 346 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 CASP14P31944 242 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 L1CAMP32004 1257 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 GKP32189 559 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MAPKAPK2P49137 400 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CCT8P50990 548 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ZNF143P52747 638 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 C21orf59P57076 290 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 NXPH1P58417 271 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ZBED6P86452 979 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 SLC20A2Q08357 652 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MAMLD1Q13495 774 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 FGL2Q14314 439 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 SUZ12Q15022 739 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 SETMARQ53H47 684 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 CARD16Q5EG05 197 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 NAPEPLDQ6IQ20 393 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 RETSATQ6NUM9 610 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 DNAJC24Q6P3W2 148 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 LEKR1Q6ZMV7 388 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ZNF662Q6ZS27 426 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ERN2Q76MJ5 926 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 KANSL1Q7Z3B3 1105 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ZNF571Q7Z3V5 609 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 ADAT2Q7Z6V5 191 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 SLFN11Q7Z7L1 901 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 PRPF39Q86UA1 669 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 GATAD2AQ86YP4 633 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CCDC170Q8IYT3 715 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 TXLNBQ8N3L3 684 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ARFGAP1Q8N6T3 406 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 PCDH20Q8N6Y1 951 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 MFSD2AQ8NA29 543 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 KDF1Q8NAX2 398 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 TMEM145Q8NBT3 493 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 NETO2Q8NC67 525 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MYRIPQ8NFW9 859 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 GRIN3AQ8TCU5 1115 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 RHBDD1Q8TEB9 315 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 SAP25Q8TEE9 199 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 KLK6Q92876 244 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 TBC1D31Q96DN5 1066 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MCEEQ96PE7 176 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ELF4Q99607 663 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 DNAJC7Q99615 494 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CNPY3Q9BT09 278 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 HDAC8Q9BY41 377 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CEP44Q9C0F1 390 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 TTYH3Q9C0H2 523 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 KLC2Q9H0B6 622 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MAGEH1Q9H213 219 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 HAUS4Q9H6D7 363 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 RETREG1Q9H6L5 497 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 CAAP1Q9H8G2 361 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 PREBQ9HCU5 417 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 AASDHPPTQ9NRN7 309 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ABHD10Q9NUJ1 306 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 AIPL1Q9NZN9 384 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MYO1AQ9UBC5 1043 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 TPX2Q9ULW0 747 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 FZD10Q9ULW2 581 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 MYO6Q9UM54 1294 aa5.93□□□□□ -1.46
RNF4-217ENST00000511892 ZFR2Q9UPR6 939 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 ARHGEF17Q96PE2 2063 aaPredicted RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 ZFC3H1O60293 1989 aaKnown RBP5.93□□□□□ -1.46
RNF4-217ENST00000511892 CXorf51AA0A1B0GTR3 108 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 TMEM191CA6NGB0 347 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 WASH4PA8MWX3 477 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 TMCO5BA8MYB1 307 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 PRAMEF26H0Y7S4 382 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 TAF4O00268 1085 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 DDX3XO00571 662 aaKnown RBP eCLIP5.92□□□□□ -1.462e-8■■■□□ 17.9
RNF4-217ENST00000511892 DYNC1I1O14576 645 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 SPINT1O43278 529 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 KDELR3O43731 214 aa5.92□□□□□ -1.46
RNF4-217ENST00000511892 DFNA5O60443 496 aa5.92□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms