RNA–Protein interactions for RNA: ENST00000510099.5

PDLIM5-214, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-214ENST00000510099 GRM3Q14832 879 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 POU6F1Q14863 301 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 KRT72Q14CN4 511 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 DLG2Q15700 870 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SNCBQ16143 134 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 USP41Q3LFD5 358 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TRIM60Q495X7 471 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TAF1BQ53T94 588 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PPM1JQ5JR12 505 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MARC1Q5VT66 337 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TPGS2Q68CL5 300 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 C16orf46Q6P387 395 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CNKSR3Q6P9H4 555 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ZCCHC23Q6ZST2 131 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 KIAA0408Q6ZU52 694 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CHST9Q7L1S5 443 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TBC1D1Q86TI0 1168 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TTC7BQ86TV6 843 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MTDHQ86UE4 582 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 C10orf107Q8IVU9 208 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ARID3BQ8IVW6 561 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MFSD6LQ8IWD5 586 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PLD6Q8N2A8 252 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 C2CD4AQ8NCU7 369 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ACVR1CQ8NER5 493 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PPP1R14CQ8TAE6 165 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ARRDC2Q8TBH0 407 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 RDH11Q8TC12 318 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MAGEC3Q8TD91 643 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 GIPC2Q8TF65 315 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NSMCE1Q8WV22 266 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PSMG2Q969U7 264 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 UTP4Q969X6 686 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PLD4Q96BZ4 506 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC7A6OSQ96CW6 309 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 VWCEQ96DN2 955 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PABPC5Q96DU9 382 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PTCD3Q96EY7 689 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MYEOVQ96EZ4 313 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TRMT2BQ96GJ1 504 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ATXN7L3BQ96GX2 97 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PRR11Q96HE9 360 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PRICKLE1Q96MT3 831 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF599Q96NL3 588 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 RPRD1AQ96P16 312 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 DEFB118Q96PH6 123 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 KLHL5Q96PQ7 755 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 RAB3IPQ96QF0 476 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SORT1Q99523 831 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 C1QTNF1Q9BXJ1 281 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 PPP1R12CQ9BZL4 782 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NMUR2Q9GZQ4 415 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 WWP1Q9H0M0 922 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TLE6Q9H808 572 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CAB39LQ9H9S4 337 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NT5MQ9NPB1 228 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 FBXO6Q9NRD1 293 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TMEM216Q9P0N5 145 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC2A6Q9UGQ3 507 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 MID2Q9UJV3 735 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 DNMT3LQ9UJW3 386 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 RPL26L1Q9UNX3 145 aaKnown RBP4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 TRIM33Q9UPN9 1127 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 YIPF1Q9Y548 306 aa4.82□□□□□ -1.64
PDLIM5-214ENST00000510099 NYNRINQ9P2P1 1898 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 TET1Q8NFU7 2136 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 MYO18AQ92614 2054 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 LOC285095A0A1B0GVY8 99 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 FAM95CA0A1B0GW59 222 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 E2F8A0AVK6 867 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 CCDC78A2IDD5 438 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 ZNF840PA6NDX5 716 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 C2orf71A6NGG8 1288 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 MROH6A6NGR9 719 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 CAPN14A8MX76 684 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 GOLGA8TH3BQL2 631 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 MUSKO15146 869 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 PHGDHO43175 533 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 COCHO43405 550 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 ITM2AO43736 263 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 ACSL4O60488 711 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 LYPLA1O75608 230 aaPredicted RBP4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 ABLIM3O94929 683 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 VAPBO95292 243 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 SEC24AO95486 1093 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 ATP6V1G2O95670 118 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 LATS1O95835 1130 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 FGF1P05230 155 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 HMBSP08397 361 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 KRT16P08779 473 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC35E2BP0CK96 405 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 RALBP11234 206 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 COL6A2P12110 1019 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 CPA3P15088 417 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 RPL17P18621 184 aaKnown RBP4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 HLA-DPA1P20036 260 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 PTPN4P29074 926 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 CRABP2P29373 138 aa4.81□□□□□ -1.64
PDLIM5-214ENST00000510099 SLC6A4P31645 630 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms