RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 ZNF267Q14586 743 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ALX1Q15699 326 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 UGP2Q16851 508 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 KLHL38Q2WGJ6 581 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ATAT1Q5SQI0 421 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 THEMIS2Q5TEJ8 643 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 MACC1Q6ZN28 852 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 C3orf62Q6ZUJ4 267 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ZDHHC17Q8IUH5 632 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 GSPT2Q8IYD1 628 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 KRT78Q8N1N4 520 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 MPP5Q8N3R9 675 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 TRPV1Q8NER1 839 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 SPATA20Q8TB22 786 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 SEPT8Q92599 483 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 USP7Q93009 1102 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 RFKQ969G6 155 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 GFM2Q969S9 779 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 RAB7BQ96AH8 199 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 SPDL1Q96EA4 605 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PRAM1Q96QH2 718 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CCDC77Q9BR77 488 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 ERP44Q9BS26 406 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 BTBD2Q9BX70 525 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 FUT8Q9BYC5 575 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 FRMD8P1Q9BZ68 369 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 MRPL37Q9BZE1 423 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PUS3Q9BZE2 481 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CCSER1Q9C0I3 900 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 HSD3B7Q9H2F3 369 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 COPS7BQ9H9Q2 264 aaPredicted RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 GALNT8Q9NY28 637 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CFAP97Q9P2B7 532 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 LARSQ9P2J5 1176 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 MAD2L2Q9UI95 211 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CYTH4Q9UIA0 394 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 CAMK2AQ9UQM7 478 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 NAALADL1Q9UQQ1 740 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 TTC21AQ8NDW8 1320 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 LRPPRCP42704 1394 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 TDRD9Q8NDG6 1382 aaKnown RBP4.63□□□□□ -1.67
NIPBL-206ENST00000509429 NUP160Q12769 1436 aa4.63□□□□□ -1.67
NIPBL-206ENST00000509429 PRDM15P57071 1507 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ABCA8O94911 1581 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 IQGAP3Q86VI3 1631 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TTC26A0AVF1 554 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF839A8K0R7 811 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FOXO6A8MYZ6 492 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 E9PBE3 544 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LIN7AO14910 233 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TO15178 435 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 GPRIN2O60269 458 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CDC123O75794 336 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RBBP9O75884 186 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 BCAS2O75934 225 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 DDAH1O94760 285 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TOMM70O94826 608 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FKBP9O95302 570 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PNPP00491 289 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 AFPP02771 609 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ASLP04424 464 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SNRPAP09012 282 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CLTAP09496 248 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 KRT3P12035 628 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FAHP16930 419 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ATF6P18850 670 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RXRAP19793 462 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TYMPP19971 482 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CCNA2P20248 432 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 NR4A1P22736 598 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CCKBRP32239 447 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 SERPINB6P35237 376 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 NUP62P37198 522 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TAGLN2P37802 199 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 NNMTP40261 264 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ETV5P41161 510 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TECP42680 631 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RABIFP47224 123 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 NT5C2P49902 561 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 GATMP50440 423 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FXR1P51114 621 aaKnown RBP eCLIP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF41P51814 821 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LUMP51884 338 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TRA2BP62995 288 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RPP30P78346 268 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ATP8B2P98198 1209 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PDE1BQ01064 536 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LIPEQ05469 1076 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LRMPQ12912 555 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RPA4Q13156 261 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 ZNF177Q13360 481 aaPredicted RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 RAPSNQ13702 412 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 PLS1Q14651 629 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 LLGL1Q15334 1064 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 KYNUQ16719 465 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 TSTQ16762 297 aaKnown RBP4.62□□□□□ -1.67
NIPBL-206ENST00000509429 FAM110CQ1W6H9 321 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CLVS2Q5SYC1 327 aa4.62□□□□□ -1.67
NIPBL-206ENST00000509429 CEP85LQ5SZL2 805 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms