RNA–Protein interactions for RNA: ENST00000509333.5

PDLIM5-212, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 743 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-212ENST00000509333 MMRN1Q13201 1228 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 ZNF423Q2M1K9 1284 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 PRAMEF14Q5SWL7 426 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 PSAPL1Q6NUJ1 521 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 PARS2Q7L3T8 475 aaKnown RBP16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 TTC7BQ86TV6 843 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 HORMAD1Q86X24 394 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 MFSD2AQ8NA29 543 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 HCAR2Q8TDS4 363 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 KLK6Q92876 244 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 GDAP1L1Q96MZ0 367 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 OSBPL1AQ9BXW6 950 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 TM7SF3Q9NS93 570 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 RCOR3Q9P2K3 495 aaPredicted RBP16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 DKK3Q9UBP4 350 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 LCMT1Q9UIC8 334 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 INTUQ9ULD6 942 aa16.36■□□□□ 0.21
PDLIM5-212ENST00000509333 PRAMEF26H0Y7S4 382 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 H0Y8X5 98 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 DFFAO00273 331 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 AREL1O15033 823 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC31A1O15431 190 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 PALMO75781 387 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 LCA5LO95447 670 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 IGSF6O95976 241 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 PEX11BO96011 259 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 MAN1A1P33908 653 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 ARHGAP25P42331 645 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 ABL2P42684 1182 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 MAGEA1P43355 309 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 RGRP47804 291 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 NOVA1P51513 510 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 MESDQ14696 234 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 RFTN1Q14699 578 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 STAT4Q14765 748 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 TMEM259Q4ZIN3 620 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 SETMARQ53H47 684 aaPredicted RBP16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 NAPEPLDQ6IQ20 393 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 SRLQ86TD4 932 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 KCTD6Q8NC69 237 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 RAB7BQ96AH8 199 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 SKA1Q96BD8 255 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 NSMCE3Q96MG7 304 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC17A9Q9BYT1 436 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 SUV39H2Q9H5I1 410 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 AASDHPPTQ9NRN7 309 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 FNDC3AQ9Y2H6 1198 aaKnown RBP16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 PCDHGB2Q9Y5G2 931 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 TRPM6Q9BX84 2022 aa16.35■□□□□ 0.21
PDLIM5-212ENST00000509333 TSPAN6O43657 245 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 MAFKO60675 156 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 CER1O95813 267 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 PAK4O96013 591 aaPredicted RBP16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 ITIH2P19823 946 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 C21orf59P57076 290 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 FAM193AP78312 1265 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC10A7Q0GE19 358 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 DPYSL3Q14195 570 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 FGL2Q14314 439 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 KRT81Q14533 505 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 PDK2Q15119 407 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 SEL1L3Q68CR1 1132 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 TMCO3Q6UWJ1 677 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 ADAT2Q7Z6V5 191 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 IQCHQ86VS3 1027 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 SPATS2Q86XZ4 545 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 TMEM145Q8NBT3 493 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 TSEN2Q8NCE0 465 aaKnown RBP16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 PCDH19Q8TAB3 1148 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 RAPGEF5Q92565 580 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 EXOC2Q96KP1 924 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 ZNF599Q96NL3 588 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 CAMK1GQ96NX5 476 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 C1QTNF2Q9BXJ5 285 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 SLC32A1Q9H598 525 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 CA5BQ9Y2D0 317 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 HS3ST3A1Q9Y663 406 aa16.34■□□□□ 0.21
PDLIM5-212ENST00000509333 MUSKO15146 869 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 SPINT1O43278 529 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 DFNA5O60443 496 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 CBFA2T3O75081 653 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 KRT7P08729 469 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 PRLRP16471 622 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 KDELR1P24390 212 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 NXPH1P58417 271 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 RPS21P63220 83 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 OVGP1Q12889 678 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 SUZ12Q15022 739 aaKnown RBP16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 SHBQ15464 509 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 SLC45A4Q5BKX6 768 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 ANKRD20A8PQ5CZ79 823 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 CAMK1DQ8IU85 385 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 RHOT2Q8IXI1 618 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 CCDC170Q8IYT3 715 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 ASB12Q8WXK4 309 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 BMFQ96LC9 184 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 ZNF641Q96N77 438 aaPredicted RBP16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 PSKH2Q96QS6 385 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 ERVMER34-1Q9H9K5 563 aa16.33■□□□□ 0.2
PDLIM5-212ENST00000509333 SP110Q9HB58 689 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms