RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 A6NNZ2 444 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 MYO1FO00160 1098 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 RNF103O00237 685 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 DFFAO00273 331 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 PRAMEF11O60813 436 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 FAM228BP0C875 321 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 THEGLP0DJG4 465 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 ERCC2P18074 760 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 EPHA8P29322 1005 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-207ENST00000509102 GKP32189 559 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 RXRGP48443 463 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 PAPOLAP51003 745 aaKnown RBP18.91■□□□□ 0.62
UBE3D-207ENST00000509102 TMEM259Q4ZIN3 620 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 HS1BP3Q53T59 392 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 SEL1L3Q68CR1 1132 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 TTC7BQ86TV6 843 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 CHCHD4Q8N4Q1 142 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 TMEM145Q8NBT3 493 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 BAHD1Q8TBE0 780 aaPredicted RBP18.91■□□□□ 0.62
UBE3D-207ENST00000509102 ADAMTS14Q8WXS8 1223 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 HSPH1Q92598 858 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 CALN1Q9BXU9 219 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 KLC2Q9H0B6 622 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 WASF3Q9UPY6 502 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 BTBD3Q9Y2F9 522 aa18.91■□□□□ 0.62
UBE3D-207ENST00000509102 CABIN1Q9Y6J0 2220 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 GOLGA8CPA6NN73 597 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 PALMO75781 387 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 SSR1P43307 286 aaKnown RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 SUOXP51687 545 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 DPYSL2Q16555 572 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 HADHQ16836 314 aaKnown RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 ST3GAL2Q16842 350 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 SMTNL2Q2TAL5 461 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 UNQ6494/PRO21346Q6UXR6 183 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 RAB44Q7Z6P3 723 aaPredicted RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 GATAD2AQ86YP4 633 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 DCP2Q8IU60 420 aaKnown RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 PAF1Q8N7H5 531 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 NIPA2Q8N8Q9 360 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 OR8K1Q8NGG5 319 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 SAP25Q8TEE9 199 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 CINPQ9BW66 212 aaPredicted RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 C1QTNF7Q9BXJ2 289 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 CPEB1Q9BZB8 566 aaKnown RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 SLC39A8Q9C0K1 460 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 FZD3Q9NPG1 666 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 LCMT1Q9UIC8 334 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 ZFR2Q9UPR6 939 aaKnown RBP18.9■□□□□ 0.62
UBE3D-207ENST00000509102 MSRB2Q9Y3D2 182 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 HS3ST3A1Q9Y663 406 aa18.9■□□□□ 0.62
UBE3D-207ENST00000509102 FPGTO14772 594 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 TOP3BO95985 862 aaKnown RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 PAK4O96013 591 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 CYP1A2P05177 515 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 HNRNPH3P31942 346 aaKnown RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 RFTN1Q14699 578 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 TMCO3Q6UWJ1 677 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 PTAR1Q7Z6K3 402 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 SPATS2Q86XZ4 545 aaKnown RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 PNPLA1Q8N8W4 532 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 HCAR2Q8TDS4 363 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 CXorf40AQ8TE69 158 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 TEKT4Q8WW24 435 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 CTNNBL1Q8WYA6 563 aaPredicted RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 EXOC2Q96KP1 924 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 PDFQ9HBH1 243 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 CWC15Q9P013 229 aaKnown RBP18.89■□□□□ 0.61
UBE3D-207ENST00000509102 CTTNBP2NLQ9P2B4 639 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 DKK3Q9UBP4 350 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 CA5BQ9Y2D0 317 aa18.89■□□□□ 0.61
UBE3D-207ENST00000509102 TP53BP1Q12888 1972 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 TMEM8BA6NDV4 472 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 J3KR12 359 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 LDOC1O95751 146 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 SERPINB6P35237 376 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 EIF4A3P38919 411 aaKnown RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 ABL2P42684 1182 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 IL10RBQ08334 325 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 ELP6Q0PNE2 266 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 KRT81Q14533 505 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 CYTH1Q15438 398 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 CYP4V2Q6ZWL3 525 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 ZNF564Q8TBZ8 553 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 ASB12Q8WXK4 309 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 ZNF641Q96N77 438 aaPredicted RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 TUBGCP5Q96RT8 1024 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 ATP13A3Q9H7F0 1226 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 KLHL11Q9NVR0 708 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 LHX3Q9UBR4 397 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 IPO11Q9UI26 975 aaKnown RBP18.88■□□□□ 0.61
UBE3D-207ENST00000509102 KLK13Q9UKR3 277 aa18.88■□□□□ 0.61
UBE3D-207ENST00000509102 IGLON5A6NGN9 336 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 AKR1B10O60218 316 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 PROS1P07225 676 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 H2AFZP0C0S5 128 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 ATXN1LP0C7T5 689 aaKnown RBP18.87■□□□□ 0.61
UBE3D-207ENST00000509102 CDK4P11802 303 aa18.87■□□□□ 0.61
UBE3D-207ENST00000509102 SERPINA4P29622 427 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms