RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TOGARAM1Q9Y4F4 1720 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ZNF233A6NK53 670 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC188H7C350 402 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CHL1O00533 1208 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 KCNAB3O43448 404 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CTNND1O60716 968 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DCTN3O75935 186 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 TPPPO94811 219 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 IFIT2P09913 472 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC159P0C7I6 412 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 IBSPP21815 317 aaPredicted RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 EEF1GP26641 437 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CTNNA1P35221 906 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 PEX5P50542 639 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 MTTPP55157 894 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 GPSM2P81274 684 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 XIAPP98170 497 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CEBPZQ03701 1054 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 BNIP1Q12981 228 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DCTN2Q13561 401 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ACVR2BQ13705 512 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 TRIM29Q14134 588 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 MORC3Q14149 939 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC6Q16204 474 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 TMEM240Q5SV17 173 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DEPDC1Q5TB30 811 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 MFSD4BQ5TF39 518 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 TBC1D9BQ66K14 1250 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 C3orf62Q6ZUJ4 267 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 MAP7D3Q8IWC1 876 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DQX1Q8TE96 717 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 PIGOQ8TEQ8 1089 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DIS3LQ8TF46 1054 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CTNNBL1Q8WYA6 563 aaPredicted RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ATP6V0A1Q93050 837 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 SLC35B4Q969S0 331 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 AZIN2Q96A70 460 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 HSPBAP1Q96EW2 488 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 MVB12AQ96EY5 273 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 PGM2Q96G03 612 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CLMNQ96JQ2 1002 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 GSDMAQ96QA5 445 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 SPATA16Q9BXB7 569 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 AGXT2Q9BYV1 514 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ANKRD2Q9GZV1 360 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ISCUQ9H1K1 167 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 SLC12A5Q9H2X9 1139 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 THAP9Q9H5L6 903 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 KCNMB3Q9NPA1 279 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DDX21Q9NR30 783 aaKnown RBP eCLIP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DLGAP2Q9P1A6 1054 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 XPR1Q9UBH6 696 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 DNAJB4Q9UDY4 337 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ADD3Q9UEY8 706 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 LIMA1Q9UHB6 759 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 HERC5Q9UII4 1024 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 G3BP2Q9UN86 482 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CARD8Q9Y2G2 431 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 R3HDM2Q9Y2K5 976 aaKnown RBP4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ARL2BPQ9Y2Y0 163 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 ATP6V0A2Q9Y487 856 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CARMIL3Q8ND23 1372 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 MED23Q9ULK4 1368 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC88AQ3V6T2 1871 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 UBR3Q6ZT12 1888 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 TAF1LQ8IZX4 1826 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 KIF13BQ9NQT8 1826 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ARFGEF1Q9Y6D6 1849 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 CYP2D7A0A087X1C5 515 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TMEM247A6NEH6 219 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 A8MXQ7 604 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TRIM38O00635 465 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 CPLX1O14810 134 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ECE2O60344 883 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 EXOC3O60645 756 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 MTRF1O75570 445 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SURF6O75683 361 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TJP3O95049 919 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 AGTP01019 485 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 KRT14P02533 472 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 PABPC4LP0CB38 370 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 HMGB2P26583 209 aaKnown RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 HPDP32754 393 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 VIPR2P41587 438 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ALDH5A1P51649 535 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 HDAC4P56524 1084 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TUBA1BP68363 451 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 DAZAP2Q15038 168 aaPredicted RBP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 RCN1Q15293 331 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SAFBQ15424 915 aaKnown RBP eCLIP4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 MEA1Q16626 185 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 ADCK5Q3MIX3 580 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 GALNTL6Q49A17 601 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 TTC39AQ5SRH9 613 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 SYCP2LQ5T4T6 812 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 MAP3K21Q5TCX8 1036 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 C6orf163Q5TEZ5 329 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 CST9Q5W186 159 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 KCTD16Q68DU8 428 aa4.74□□□□□ -1.65
PDLIM5-211ENST00000508531 OR52E8Q6IFG1 317 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms