RNA–Protein interactions for RNA: ENST00000508500.1

LMNA-222, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 848 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-222ENST00000508500 KRIT1O00522 736 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 RASA4O43374 803 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 BUB1O43683 1085 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 RFPL3O75679 317 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 TMCC1O94876 653 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 UGT2B4P06133 528 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 ITIH2P19823 946 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 DGKAP23743 735 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 AKT2P31751 481 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 SNRPD1P62314 119 aaKnown RBP16.46■□□□□ 0.23
LMNA-222ENST00000508500 RPS21P63220 83 aaKnown RBP16.46■□□□□ 0.23
LMNA-222ENST00000508500 MAPK8IP2Q13387 824 aaPredicted RBP16.46■□□□□ 0.23
LMNA-222ENST00000508500 CYTH1Q15438 398 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 ZNF805Q5CZA5 627 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 EFHC2Q5JST6 749 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 KIAA1161Q6NSJ0 714 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 Q6ZSR6 202 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 CYP4V2Q6ZWL3 525 aaPredicted RBP16.46■□□□□ 0.23
LMNA-222ENST00000508500 ZNF571Q7Z3V5 609 aaPredicted RBP16.46■□□□□ 0.23
LMNA-222ENST00000508500 TMC6Q7Z403 805 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 LRIG1Q96JA1 1093 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 VCPIP1Q96JH7 1222 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 PEBP4Q96S96 227 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 C1QTNF2Q9BXJ5 285 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 CALN1Q9BXU9 219 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 LHX3Q9UBR4 397 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 KIF26BQ2KJY2 2108 aa16.46■□□□□ 0.23
LMNA-222ENST00000508500 A0A1B0GTH6 734 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 GOLGA6L3A6NEY3 463 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 IGLON5A6NGN9 336 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 DDX3XO00571 662 aaKnown RBP eCLIP16.45■□□□□ 0.22
LMNA-222ENST00000508500 AREL1O15033 823 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 INSIG1O15503 277 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 SIGLEC6O43699 453 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 PIAS2O75928 621 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 POP4O95707 220 aaKnown RBP16.45■□□□□ 0.22
LMNA-222ENST00000508500 GEMIN4P57678 1058 aaKnown RBP16.45■□□□□ 0.22
LMNA-222ENST00000508500 YBEYP58557 167 aaPredicted RBP16.45■□□□□ 0.22
LMNA-222ENST00000508500 SERINC3Q13530 473 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 ZNF542PQ5EBM4 170 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 LRRC73Q5JTD7 316 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 DCUN1D2Q6PH85 259 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 C19orf48Q6RUI8 117 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 PDZD3Q86UT5 571 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 TMPRSS12Q86WS5 348 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 UMODL1-AS1Q8N2C9 162 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 FEM1CQ96JP0 617 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 TSPY26PQ9H489 355 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 LRRC19Q9H756 370 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 PDFQ9HBH1 243 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 SCUBE2Q9NQ36 999 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 AIPL1Q9NZN9 384 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 HPCAL4Q9UM19 191 aa16.45■□□□□ 0.22
LMNA-222ENST00000508500 A0A1W2PQC6 194 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 TMEM191CA6NGB0 347 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 A6NNZ2 444 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 SMTNL1A8MU46 457 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 C1SP09871 688 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 CCDC172P0C7W6 258 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 CKMT2P17540 419 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 PRKCIP41743 596 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 ZNF165P49910 485 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 AIF1P55008 147 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 CYP4F3Q08477 520 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 FZD2Q14332 565 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 NR1I3Q14994 352 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 COL28A1Q2UY09 1125 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 INO80DQ53TQ3 878 aaPredicted RBP16.44■□□□□ 0.22
LMNA-222ENST00000508500 GDPD4Q6W3E5 623 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 KYAT3Q6YP21 454 aaKnown RBP16.44■□□□□ 0.22
LMNA-222ENST00000508500 LENG8Q96PV6 779 aaPredicted RBP16.44■□□□□ 0.22
LMNA-222ENST00000508500 EPAS1Q99814 870 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 NAT10Q9H0A0 1025 aaKnown RBP16.44■□□□□ 0.22
LMNA-222ENST00000508500 KLF15Q9UIH9 416 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 RAXQ9Y2V3 346 aa16.44■□□□□ 0.22
LMNA-222ENST00000508500 GCN1Q92616 2671 aaKnown RBP16.43■□□□□ 0.22
LMNA-222ENST00000508500 LY6G6EA0A0G2JKS1 128 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 ANKRD62A6NC57 917 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 ZSCAN5CA6NGD5 496 aaPredicted RBP16.43■□□□□ 0.22
LMNA-222ENST00000508500 J3KR12 359 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 TSPAN6O43657 245 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 SKILP12757 684 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 MYF5P13349 255 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 TIMP2P16035 220 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 ACP1P24666 158 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 PSMA2P25787 234 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 ZNF211Q13398 564 aaPredicted RBP16.43■□□□□ 0.22
LMNA-222ENST00000508500 ASIC2Q16515 512 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 PTAR1Q7Z6K3 402 aaPredicted RBP16.43■□□□□ 0.22
LMNA-222ENST00000508500 ZNF354CQ86Y25 554 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 OR4C6Q8NH72 309 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 CASKIN2Q8WXE0 1202 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 ASB12Q8WXK4 309 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 RAB7BQ96AH8 199 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 CENPTQ96BT3 561 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 EXOC2Q96KP1 924 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 GDAP1L1Q96MZ0 367 aa16.43■□□□□ 0.22
LMNA-222ENST00000508500 KCTD15Q96SI1 283 aaPredicted RBP16.43■□□□□ 0.22
LMNA-222ENST00000508500 SNRNP25Q9BV90 132 aaKnown RBP16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms