RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 MYLK3Q32MK0 819 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 ZNF542PQ5EBM4 170 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 TPRG1LQ5T0D9 272 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 CCDC183Q5T5S1 534 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 KDM7AQ6ZMT4 941 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 MCOLN2Q8IZK6 566 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 RYBPQ8N488 228 aaPredicted RBP13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 RAB7BQ96AH8 199 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 HMCESQ96FZ2 354 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 GDAP1L1Q96MZ0 367 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 LENG8Q96PV6 779 aaPredicted RBP13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 CNPY3Q9BT09 278 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 C1QTNF2Q9BXJ5 285 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 OSBPL1AQ9BXW6 950 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 KLC2Q9H0B6 622 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 DNAJC28Q9NX36 388 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 TAS2R14Q9NYV8 317 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 FZD10Q9ULW2 581 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 U3KQA8 63 aa13.2□□□□□ -0.3
HMGCS1-205ENST00000508319 COL27A1Q8IZC6 1860 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 ASXL3Q9C0F0 2248 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 ANKRD62A6NC57 917 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 IGLON5A6NGN9 336 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 WASH4PA8MWX3 477 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 RASA4BC9J798 803 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 GOLGA6L22H0YM25 854 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 TEX33O43247 280 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 RASA4O43374 803 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 BUB1O43683 1085 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 POP4O95707 220 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 MBD3O95983 291 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 CKMT1AP12532 417 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 NME1P15531 152 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 FERP16591 822 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 RABIFP47224 123 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 PARP15Q460N3 678 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 LRRC73Q5JTD7 316 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 SCYL2Q6P3W7 929 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 IRF2BP2Q7Z5L9 587 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 PDZD3Q86UT5 571 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 PARGQ86W56 976 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 ZNF354CQ86Y25 554 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 DCP2Q8IU60 420 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 DCBLD1Q8N8Z6 715 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 NETO2Q8NC67 525 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 DENND6BQ8NEG7 585 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 ZNF548Q8NEK5 533 aaPredicted RBP13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 HNRNPLLQ8WVV9 542 aaKnown RBP13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 ASB12Q8WXK4 309 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 ARHGEF26Q96DR7 871 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 KLHL32Q96NJ5 620 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 EPAS1Q99814 870 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 TTYH3Q9C0H2 523 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 NRSN2Q9GZP1 204 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 NLGN3Q9NZ94 848 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 KLF15Q9UIH9 416 aa13.19□□□□□ -0.3
HMGCS1-205ENST00000508319 BPTFQ12830 3046 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 ANKRD36A6QL64 1941 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 NEMP1O14524 444 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 FPGTO14772 594 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 SCAMP1O15126 338 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CREB3O43889 395 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 NEBLO76041 1014 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 IGSF6O95976 241 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CSF2P04141 144 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 YBEYP58557 167 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 PFN3P60673 137 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 RHOAP61586 193 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 HNRNPKP61978 463 aaKnown RBP eCLIP13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 DAB2P98082 770 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 SERINC3Q13530 473 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 PDE1CQ14123 709 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 RTP5Q14D33 572 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 HS1BP3Q53T59 392 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 INO80DQ53TQ3 878 aaPredicted RBP13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 ACAD10Q6JQN1 1059 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 DCUN1D2Q6PH85 259 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 TMC6Q7Z403 805 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CACTIN-AS1Q8N1I8 211 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 UMODL1-AS1Q8N2C9 162 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CASKIN2Q8WXE0 1202 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CENPTQ96BT3 561 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 APOLD1Q96LR9 279 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CATSPERBQ9H7T0 1116 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 TMEM63CQ9P1W3 806 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 LHX3Q9UBR4 397 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 MYO6Q9UM54 1294 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 CLCA2Q9UQC9 943 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 MFHAS1Q9Y4C4 1052 aa13.18□□□□□ -0.3
HMGCS1-205ENST00000508319 LRP4O75096 1905 aa13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 K7ESM1 405 aa13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 FGF10O15520 208 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 TLX3O43711 291 aaPredicted RBP13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 ALPPL2P10696 532 aa13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 MYF5P13349 255 aa13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 IGFALSP35858 605 aa13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 EIF2B5Q13144 721 aaKnown RBP13.17□□□□□ -0.3
HMGCS1-205ENST00000508319 SGCGQ13326 291 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms