RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 HS3ST3A1Q9Y663 406 aa6.55□□□□□ -1.36
HMGN1P16-201ENST00000508308 CXorf51AA0A1B0GTR3 108 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 TCRBV5S1A1TA0A578 114 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 IGLON5A6NGN9 336 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 A6NNZ2 444 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 K7ESM1 405 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 AREL1O15033 823 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 SCAMP1O15126 338 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 C1QL1O75973 258 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 GFPT2O94808 682 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 LRIG2O94898 1065 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 MT-CO3P00414 261 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 CSF2P04141 144 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PRB1P04280 392 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 NME1P15531 152 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 RHOQP17081 205 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 EEF1GP26641 437 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 AKT2P31751 481 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 RFC1P35251 1148 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PTPN9P43378 593 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 ABCG1P45844 678 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 DNA2P51530 1060 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 NEK3P51956 506 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PFN3P60673 137 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 RPS21P63220 83 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 TLE3Q04726 772 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 EIF2B5Q13144 721 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 KRT31Q15323 416 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 CDO1Q16878 200 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 TPD52L1Q16890 204 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 LRRC73Q5JTD7 316 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 ATXN7L2Q5T6C5 722 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 ACBD5Q5T8D3 534 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 RETSATQ6NUM9 610 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 KYAT3Q6YP21 454 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 APTXQ7Z2E3 356 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 FAM114A1Q8IWE2 563 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PYROXD2Q8N2H3 581 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PCDH20Q8N6Y1 951 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 FAM181AQ8N9Y4 354 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 ZNF548Q8NEK5 533 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 SNIP1Q8TAD8 396 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 BAP1Q92560 729 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 FUBP1Q96AE4 644 aaKnown RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 CENPTQ96BT3 561 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 IFT43Q96FT9 208 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 CCDC114Q96M63 670 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 LENG8Q96PV6 779 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 C11orf70Q9BRQ4 267 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 TM6SF2Q9BZW4 377 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 OSBPL2Q9H1P3 480 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 VPS16Q9H269 839 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PDCL3Q9H2J4 239 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 TCEAL2Q9H3H9 227 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 FAM207AQ9NSI2 230 aaPredicted RBP6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 LMBRD1Q9NUN5 540 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 TMEM248Q9NWD8 314 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 DNAJC28Q9NX36 388 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 NLGN3Q9NZ94 848 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 CHMP5Q9NZZ3 219 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 DNAI1Q9UI46 699 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 PAXBP1Q9Y5B6 917 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 AK5Q9Y6K8 562 aa6.54□□□□□ -1.36
HMGN1P16-201ENST00000508308 AHCTF1Q8WYP5 2266 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 LRP4O75096 1905 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 PMS2P1A4D2B8 440 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 KRIT1O00522 736 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 PES1O00541 588 aaKnown RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 INSIG1O15503 277 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 KDELR3O43731 214 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 LZTS3O60299 673 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 GCATO75600 419 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 GSRP00390 522 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 MPOP05164 745 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 UGT2B4P06133 528 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 PLEKP08567 350 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 TIMP2P16035 220 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 TGM2P21980 687 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 SOX5P35711 763 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 RECQLP46063 649 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 MAPKAPK2P49137 400 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 GSCP56915 257 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 POLR2FP61218 127 aaKnown RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 E2F1Q01094 437 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 MYLK3Q32MK0 819 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 TBC1D25Q3MII6 688 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 ZNF805Q5CZA5 627 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 PPP1R15BQ5SWA1 713 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 KCTD16Q68DU8 428 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 KIAA1161Q6NSJ0 714 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 WDR59Q6PJI9 974 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 CLEC17AQ6ZS10 378 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 RBM43Q6ZSC3 357 aaKnown RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 STRADAQ7RTN6 431 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 PTAR1Q7Z6K3 402 aaPredicted RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 ZNF677Q86XU0 584 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 RBFAQ8N0V3 343 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 OR2AP1Q8NGE2 309 aa6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 ENOX1Q8TC92 643 aaKnown RBP6.53□□□□□ -1.36
HMGN1P16-201ENST00000508308 FAM172AQ8WUF8 416 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms