RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 RASA4BC9J798 803 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 SCAMP1O15126 338 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 RASA4O43374 803 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 CREB3O43889 395 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 TMCC1O94876 653 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 GJB6O95452 261 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 GP1BAP07359 652 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 XPAP23025 273 aaPredicted RBP14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 TPI1P60174 286 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 YPEL5P62699 121 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 TPM4P67936 248 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 DNAJC3Q13217 504 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 SERINC3Q13530 473 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 ASIC2Q16515 512 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 HES3Q5TGS1 186 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 PLEKHA7Q6IQ23 1121 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 TMC6Q7Z403 805 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 TTC7BQ86TV6 843 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 MDM1Q8TC05 714 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 KLK6Q92876 244 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 BMFQ96LC9 184 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 MYOCQ99972 504 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 HSD3B7Q9H2F3 369 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 MRPL47Q9HD33 250 aaKnown RBP14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 AIPL1Q9NZN9 384 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 SCINQ9Y6U3 715 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 APC2O95996 2303 aa14.63□□□□□ -0.07
HMGCS1-203ENST00000507004 URB1O60287 2271 aaKnown RBP14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 ARHGAP42A6NI28 874 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 TPP1O14773 563 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 AREL1O15033 823 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 SIGLEC6O43699 453 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 SDC3O75056 442 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 TM7SF2O76062 418 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 CSF2P04141 144 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 UGT2B4P06133 528 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 MYBL1P10243 752 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 CKMT1AP12532 417 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 NME1P15531 152 aaKnown RBP14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 PSMA2P25787 234 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 PRKCIP41743 596 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 RPL7AP62424 266 aaKnown RBP14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 CYP4F3Q08477 520 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 RTP5Q14D33 572 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 ACAP1Q15027 740 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 ANO6Q4KMQ2 910 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 RAB6CQ53S08 254 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 DNAAF5Q86Y56 855 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 SLC25A45Q8N413 288 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 CXorf40AQ8TE69 158 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 BAP1Q92560 729 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 IQCDQ96DY2 449 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 ZNF641Q96N77 438 aaPredicted RBP14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 KLHL32Q96NJ5 620 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 TUBGCP5Q96RT8 1024 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 RAB6CQ9H0N0 254 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 FZD3Q9NPG1 666 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 DNAJC28Q9NX36 388 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 UBA2Q9UBT2 640 aaPredicted RBP14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 CLCA2Q9UQC9 943 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 CA5BQ9Y2D0 317 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 GPSM3Q9Y4H4 160 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 DOCK9Q9BZ29 2069 aa14.62□□□□□ -0.07
HMGCS1-203ENST00000507004 IGLON5A6NGN9 336 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 TMEM110-MUSTN1A8MSY1 372 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 TRIM38O00635 465 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 ABL2P42684 1182 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 CSNK1DP48730 415 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 ZNF165P49910 485 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 BLKP51451 505 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 THOP1P52888 689 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 CLDN2P57739 230 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 PFN3P60673 137 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 MAMLD1Q13495 774 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 RFTN1Q14699 578 aaPredicted RBP14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 FIGNQ5HY92 759 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 CFAP58Q5T655 872 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 ERMARDQ5T6L9 678 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 TMCO4Q5TGY1 634 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 ZCCHC8Q6NZY4 707 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 BRAT1Q6PJG6 821 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 SLC22A18ASQ8N1D0 253 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 LZTR1Q8N653 840 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 ATL2Q8NHH9 583 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 TPCN2Q8NHX9 752 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 GLMNQ92990 594 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 GRAMD1AQ96CP6 724 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 HMCESQ96FZ2 354 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 KLF6Q99612 283 aaPredicted RBP14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 SYT11Q9BT88 431 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 NOL6Q9H6R4 1146 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 SPASTQ9UBP0 616 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 SALL4Q9UJQ4 1053 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 AP4E1Q9UPM8 1137 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 BZW2Q9Y6E2 419 aaKnown RBP14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 PKD1L2Q7Z442 2459 aa14.61□□□□□ -0.07
HMGCS1-203ENST00000507004 A0A087WV48 116 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 CFAP69A5D8W1 941 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 FAM149AA5PLN7 773 aa14.6□□□□□ -0.07
HMGCS1-203ENST00000507004 POM121BA6NF01 834 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms