RNA–Protein interactions for RNA: ENST00000506880.5

PDGFC-205, Transcript of platelet derived growth factor C, humanhuman

TSL 2

Gene PDGFC, Length 1,014 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-205ENST00000506880 PYGLP06737 847 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF30P17039 623 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 NDUFV2P19404 249 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 GJC1P36383 396 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 FNTAP49354 379 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CCNHP51946 323 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 NEK3P51956 506 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CDK16Q00536 496 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 GBE1Q04446 702 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CSTF1Q05048 431 aaKnown RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 BCL2L1Q07817 233 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 MPP3Q13368 585 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 LAMB3Q13751 1172 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CYP1B1Q16678 543 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF569Q5MCW4 686 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 WDR45BQ5MNZ6 344 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 EMC10Q5UCC4 262 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 DAB2IPQ5VWQ8 1189 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 PEAR1Q5VY43 1037 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ZDHHC20Q5W0Z9 365 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 NAIF1Q69YI7 327 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 LAIR1Q6GTX8 287 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 DPY19L3Q6ZPD9 716 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 Q6ZVU0 165 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SYDE1Q6ZW31 735 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ERN2Q76MJ5 926 aaKnown RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 LPCAT2Q7L5N7 544 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SRLQ86TD4 932 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 NLRP8Q86W28 1048 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 TRIM69Q86WT6 500 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CCDC33Q8N5R6 958 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 C12orf50Q8NA57 414 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CCNYQ8ND76 341 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 DENND6BQ8NEG7 585 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 MDGA1Q8NFP4 955 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 OR2T34Q8NGX1 318 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 CEP76Q8TAP6 659 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SLC35B2Q8TB61 432 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 PIP4K2CQ8TBX8 421 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 DTX3LQ8TDB6 740 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 HTR3CQ8WXA8 447 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SKA1Q96BD8 255 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ZNF419Q96HQ0 510 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 RPL10LQ96L21 214 aaKnown RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 TEKT5Q96M29 485 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 LYSMD1Q96S90 227 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ADGRE3Q9BY15 652 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 MKRN2Q9H000 416 aaKnown RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SUV39H2Q9H5I1 410 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 RAD18Q9NS91 495 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ETNK2Q9NVF9 386 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 WSB2Q9NYS7 404 aaPredicted RBP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 LHX3Q9UBR4 397 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 PHTF1Q9UMS5 762 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 HEY1Q9Y5J3 304 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 SAR1BQ9Y6B6 198 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.57□□□□□ -1.04
PDGFC-205ENST00000506880 WASF2Q9Y6W5 498 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 ABCA7Q8IZY2 2146 aa8.57□□□□□ -1.04
PDGFC-205ENST00000506880 J3KR12 359 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 PLRG1O43660 514 aaKnown RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 NDUFS2O75306 463 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 PPFIA2O75334 1257 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 GCATO75600 419 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 MT-CO1P00395 513 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 RBP3P10745 1247 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TEAD1P28347 426 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 SLC8A1P32418 973 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 FDFT1P37268 417 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 PAFAH1B1P43034 410 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 CTSOP43234 321 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 STK19P49842 368 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TPMTP51580 245 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 EIF3EP60228 445 aaKnown RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 GNG11P61952 73 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 PDE1BQ01064 536 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 CREB5Q02930 508 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 SLC10A2Q12908 348 aaPredicted RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 PRPSAP1Q14558 356 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 CYTH1Q15438 398 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 CFAP58Q5T655 872 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 DCAF12L1Q5VU92 463 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 ANO7Q6IWH7 933 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 ERAP2Q6P179 960 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 NCEH1Q6PIU2 408 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 GDPD4Q6W3E5 623 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 IQCHQ86VS3 1027 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 DCP2Q8IU60 420 aaKnown RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 STK40Q8N2I9 435 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 ACTL9Q8TC94 416 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 HMGB4Q8WW32 186 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 SORCS1Q8WY21 1168 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 DNASE2BQ8WZ79 361 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 SLCO2A1Q92959 643 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 TADA1Q96BN2 335 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 IMP4Q96G21 291 aaKnown RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 CELF6Q96J87 481 aaKnown RBP8.56□□□□□ -1.04
PDGFC-205ENST00000506880 FEM1CQ96JP0 617 aa8.56□□□□□ -1.04
PDGFC-205ENST00000506880 FCRL5Q96RD9 977 aa8.56□□□□□ -1.04
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