RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PSKH2Q96QS6 385 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 OSBPL1AQ9BXW6 950 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 MIR1-1HGQ9H1L0 117 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 KDM4CQ9H3R0 1056 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 CAPN10Q9HC96 672 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 SEPT3Q9UH03 358 aa18.48■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3DA0A087WVF3 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3IA0A087WXS9 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3EA0A087X179 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3KA0A087X1G2 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3FA6NER0 549 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 C16orf96A6NNT2 1141 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3LB9A6J9 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 APOL1O14791 398 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 CFIP05156 583 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3HP0C7X1 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 KRT10P13645 584 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 CD27P26842 260 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 CSNK1DP48730 415 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 CCR5P51681 352 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 DYNLT1P63172 113 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 LMNB2Q03252 620 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 ADCY2Q08462 1091 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 LLGL1Q15334 1064 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 DUOXA1Q1HG43 343 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3GQ6DHY5 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3CQ6IPX1 549 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 SRLQ86TD4 932 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 RFX6Q8HWS3 928 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 LRRC49Q8IUZ0 686 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TBC1D3Q8IZP1 549 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 C12orf50Q8NA57 414 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 KIAA1524Q8TCG1 905 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TRAF3IP1Q8TDR0 691 aaPredicted RBP18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 CPEB1Q9BZB8 566 aaKnown RBP18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 PREBQ9HCU5 417 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 CAPN6Q9Y6Q1 641 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 DNAH14Q0VDD8 3507 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 ANKRD36A6QL64 1941 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 DCHS1Q96JQ0 3298 aa18.47■□□□□ 0.55
PDLIM7-216ENST00000506537 TTC24A2A3L6 582 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 KHNYNO15037 678 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 LATO43561 262 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 SERPINF2P08697 491 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 CR2P20023 1033 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 CTNNA2P26232 953 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 RAD51Q06609 339 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 ZNF235Q14590 738 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 IFI16Q16666 785 aaKnown RBP18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 AASDHQ4L235 1098 aaPredicted RBP18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 ODF2Q5BJF6 829 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 LRRC73Q5JTD7 316 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 NT5DC3Q86UY8 548 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 TRIM69Q86WT6 500 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 TXLNBQ8N3L3 684 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 TEX26Q8N6G2 289 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 EXD1Q8NHP7 514 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 CEP76Q8TAP6 659 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 MAML1Q92585 1016 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 HDAC11Q96DB2 347 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 OLFM3Q96PB7 478 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 TSGA13Q96PP4 275 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 MGME1Q9BQP7 344 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 SUSD2Q9UGT4 822 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 GGT7Q9UJ14 662 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 PCDHA3Q9Y5H8 950 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 HEY1Q9Y5J3 304 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 FADS3Q9Y5Q0 445 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 ADAMTS9Q9P2N4 1935 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 SPTBN4Q9H254 2564 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 CACNA1EQ15878 2313 aa18.46■□□□□ 0.55
PDLIM7-216ENST00000506537 DOCK9Q9BZ29 2069 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 hCG_1818297A0A087WSY0 165 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 A0A1B0GTW7 788 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 A0A1W2PPC4 97 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 TSPAN11A1L157 253 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 BCAT2O15382 392 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 FOXD2O60548 495 aaPredicted RBP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 RNGTTO60942 597 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 ZRANB2O95218 330 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 MAT2AP31153 395 aaKnown RBP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 MMP13P45452 471 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 PEX5P50542 639 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 MAXP61244 160 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 NSUN2Q08J23 767 aaKnown RBP eCLIP18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 MARC1Q5VT66 337 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 KAZNQ674X7 775 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 FBXL19Q6PCT2 694 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 LAYNQ6UX15 382 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 RABEPKQ7Z6M1 372 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 ZSWIM9Q86XI8 627 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 CAMK1DQ8IU85 385 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 ALG3Q92685 438 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 FATE1Q969F0 183 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 SLC6A18Q96N87 628 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 TUBGCP5Q96RT8 1024 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 LGMNQ99538 433 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 HERPUD2Q9BSE4 406 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 EDEM2Q9BV94 578 aa18.45■□□□□ 0.54
PDLIM7-216ENST00000506537 MAK16Q9BXY0 300 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms