RNA–Protein interactions for RNA: ENST00000505982.1

CHD1-204, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 758 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-204ENST00000505982 DPP10Q8N608 796 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 C1orf131Q8NDD1 294 aaKnown RBP6.28□□□□□ -1.4
CHD1-204ENST00000505982 MAP4K1Q92918 833 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 GTF3C6Q969F1 213 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 H2AFJQ9BTM1 129 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 SCNM1Q9BWG6 230 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 MAK16Q9BXY0 300 aaKnown RBP6.28□□□□□ -1.4
CHD1-204ENST00000505982 ARPP21Q9UBL0 812 aaPredicted RBP6.28□□□□□ -1.4
CHD1-204ENST00000505982 PCDHGB4Q9UN71 923 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 A4GNTQ9UNA3 340 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 CAPN7Q9Y6W3 813 aa6.28□□□□□ -1.4
CHD1-204ENST00000505982 ARHGEF17Q96PE2 2063 aaPredicted RBP6.28□□□□□ -1.4
CHD1-204ENST00000505982 PROB1E7EW31 1015 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 RHODO00212 210 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 KIF1CO43896 1103 aaKnown RBP6.27□□□□□ -1.41
CHD1-204ENST00000505982 UGDHO60701 494 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 TMCC1O94876 653 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 CSH1P0DML2 217 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 CSH2P0DML3 217 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 AKR1B1P15121 316 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 CLCNKBP51801 687 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 NHLH1Q02575 133 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 ACVR2BQ13705 512 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 AAGABQ6PD74 315 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 KLHL35Q6PF15 583 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 TSSK4Q6SA08 328 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 ZNF813Q6ZN06 617 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 LURAP1LQ8IV03 231 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 KIAA2013Q8IYS2 634 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 RASSF8Q8NHQ8 419 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 ATOH1Q92858 354 aaPredicted RBP6.27□□□□□ -1.41
CHD1-204ENST00000505982 CMTM3Q96MX0 182 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 BBS4Q96RK4 519 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 FBRSL1Q9HCM7 1045 aaKnown RBP6.27□□□□□ -1.41
CHD1-204ENST00000505982 RRP7BPQ9NSQ0 103 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 NKIRAS2Q9NYR9 191 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 SLCO3A1Q9UIG8 710 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 RPS6KA6Q9UK32 745 aa6.27□□□□□ -1.41
CHD1-204ENST00000505982 INTS6Q9UL03 887 aaKnown RBP6.27□□□□□ -1.41
CHD1-204ENST00000505982 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.26□□□□□ -1.41
CHD1-204ENST00000505982 C2CD4BA6NLJ0 364 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 BCAT2O15382 392 aaPredicted RBP6.26□□□□□ -1.41
CHD1-204ENST00000505982 NEURL1O76050 574 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 TUBB4AP04350 444 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 LCKP06239 509 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 KRT10P13645 584 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 EDN2P20800 178 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 TM4SF1P30408 202 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 DPP6P42658 865 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 HSF1Q00613 529 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 FOXF2Q12947 444 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 HIST2H2ACQ16777 129 aaPredicted RBP6.26□□□□□ -1.41
CHD1-204ENST00000505982 DUSP28Q4G0W2 176 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 SYTL3Q4VX76 610 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 ZNF280DQ6N043 979 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 MIS18BP1Q6P0N0 1132 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 CMASQ8NFW8 434 aaPredicted RBP6.26□□□□□ -1.41
CHD1-204ENST00000505982 HDAC7Q8WUI4 952 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 SMG7Q92540 1137 aaKnown RBP6.26□□□□□ -1.41
CHD1-204ENST00000505982 WDFY2Q96P53 400 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 SERINC2Q96SA4 455 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 SEMA4GQ9NTN9 838 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 NCKIPSDQ9NZQ3 722 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 HAO1Q9UJM8 370 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 UTS2RQ9UKP6 389 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 DDX52Q9Y2R4 599 aaKnown RBP eCLIP6.26□□□□□ -1.41
CHD1-204ENST00000505982 FAM96BQ9Y3D0 163 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 SNX8Q9Y5X2 465 aa6.26□□□□□ -1.41
CHD1-204ENST00000505982 AOX1Q06278 1338 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 TYW5A2RUC4 315 aaKnown RBP6.25□□□□□ -1.41
CHD1-204ENST00000505982 DDTLA6NHG4 134 aaPredicted RBP6.25□□□□□ -1.41
CHD1-204ENST00000505982 FAM157AC9JC47 383 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 LIASO43766 372 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 HEXAP06865 529 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 CDH2P19022 906 aaPredicted RBP6.25□□□□□ -1.41
CHD1-204ENST00000505982 PSMB10P40306 273 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 PRAMEP78395 509 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 CEBPZQ03701 1054 aaKnown RBP6.25□□□□□ -1.41
CHD1-204ENST00000505982 STIM1Q13586 685 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 CPLX2Q6PUV4 134 aaKnown RBP6.25□□□□□ -1.41
CHD1-204ENST00000505982 TDRPQ86YL5 185 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 SRRM1Q8IYB3 904 aaKnown RBP6.25□□□□□ -1.41
CHD1-204ENST00000505982 ZNF398Q8TD17 642 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 JAKMIP2Q96AA8 810 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 MAP7D2Q96T17 732 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 MXD3Q9BW11 206 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 AAMDCQ9H7C9 122 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 POLR1BQ9H9Y6 1135 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 SCPEP1Q9HB40 452 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 LAMP3Q9UQV4 416 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 RAP2CQ9Y3L5 183 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 MST1RQ04912 1400 aa6.25□□□□□ -1.41
CHD1-204ENST00000505982 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.24□□□□□ -1.41
CHD1-204ENST00000505982 AGAP14A8MT82 685 aa6.24□□□□□ -1.41
CHD1-204ENST00000505982 USP17L23D6RBM5 183 aa6.24□□□□□ -1.41
CHD1-204ENST00000505982 PAGE4O60829 102 aa6.24□□□□□ -1.41
CHD1-204ENST00000505982 RBMXL2O75526 392 aaKnown RBP6.24□□□□□ -1.41
CHD1-204ENST00000505982 GJB3O75712 270 aa6.24□□□□□ -1.41
CHD1-204ENST00000505982 CLTBP09497 229 aa6.24□□□□□ -1.41
CHD1-204ENST00000505982 PCNAP12004 261 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms