RNA–Protein interactions for RNA: ENST00000505945.1

SIL1-208, Transcript of SIL1 nucleotide exchange factor, humanhuman

TSL 1 (best)

Gene SIL1, Length 250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-208ENST00000505945 KDELR3O43731 214 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 RAMP2O60895 175 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 C1QL1O75973 258 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 POP4O95707 220 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 PLEKP08567 350 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 ITIH2P19823 946 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 TGM2P21980 687 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 EEF1GP26641 437 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 RFC1P35251 1148 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 LSSP48449 732 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 MAPKAPK2P49137 400 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 HDAC4P56524 1084 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 GEMIN4P57678 1058 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 PFN3P60673 137 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 POLR2FP61218 127 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 SNRPD1P62314 119 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 CXADRP78310 365 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 C1orf61Q13536 156 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 ISXQ2M1V0 245 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 LRRC73Q5JTD7 316 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 ATXN7L2Q5T6C5 722 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 ZCCHC8Q6NZY4 707 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 GUSBP11Q6P575 273 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 STRADAQ7RTN6 431 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 EFL1Q7Z2Z2 1120 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 ZSCAN30Q86W11 494 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 ZNF677Q86XU0 584 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 RBFAQ8N0V3 343 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 CCDC185Q8N715 623 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 NETO2Q8NC67 525 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 ZNF248Q8NDW4 579 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 ASB12Q8WXK4 309 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 CENPIQ92674 756 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 CENPTQ96BT3 561 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 TBC1D31Q96DN5 1066 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 HIC2Q96JB3 615 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 ZNF578Q96N58 590 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 TCEAL2Q9H3H9 227 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 RETREG1Q9H6L5 497 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 POLR1BQ9H9Y6 1135 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 USP29Q9HBJ7 922 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 NLRC4Q9NPP4 1024 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 FAM207AQ9NSI2 230 aaPredicted RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 EVA1BQ9NVM1 165 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 NEU3Q9UQ49 428 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 CSNK1G3Q9Y6M4 447 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 SETXQ7Z333 2677 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 RP1P56715 2156 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 CHD5Q8TDI0 1954 aa11.54□□□□□ -0.56
SIL1-208ENST00000505945 FLNBO75369 2602 aaKnown RBP11.54□□□□□ -0.56
SIL1-208ENST00000505945 ZNF462Q96JM2 2506 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 AREL1O15033 823 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 EPHB6O15197 1021 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 BUB1O43683 1085 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 MMP20O60882 483 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 GCATO75600 419 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 GSRP00390 522 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 KRT3P12035 628 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 SOX5P35711 763 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 PTPN9P43378 593 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 THOP1P52888 689 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 PCBP4P57723 403 aaKnown RBP11.53□□□□□ -0.56
SIL1-208ENST00000505945 PTP4A2Q12974 167 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 CRTC1Q6UUV9 634 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 GDPD4Q6W3E5 623 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 VPS36Q86VN1 386 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 ZNF354CQ86Y25 554 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 LSMEM2Q8N112 164 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 PYROXD2Q8N2H3 581 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 DENND6BQ8NEG7 585 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 FAM172AQ8WUF8 416 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 ARHGEF26Q96DR7 871 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 PCDHB18PQ96TA0 734 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 IL12RB2Q99665 862 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 KLC2Q9H0B6 622 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 NUP62CLQ9H1M0 184 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 NOL6Q9H6R4 1146 aaKnown RBP11.53□□□□□ -0.56
SIL1-208ENST00000505945 CHMP5Q9NZZ3 219 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 SALL4Q9UJQ4 1053 aa11.53□□□□□ -0.56
SIL1-208ENST00000505945 PNMA8BQ9ULN7 279 aaPredicted RBP11.53□□□□□ -0.56
SIL1-208ENST00000505945 TEX51A0A1B0GUA7 166 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 A0A1W2PNU3 283 aaPredicted RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 EME2A4GXA9 379 aaPredicted RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 TPP1O14773 563 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 MUSKO15146 869 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 CASC3O15234 703 aaKnown RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 TM7SF2O76062 418 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 DXOO77932 396 aaKnown RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 TMCC1O94876 653 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 ZIC2O95409 532 aaPredicted RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 UNGP13051 313 aaPredicted RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 TIMP2P16035 220 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 EPHB2P29323 1055 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 IGFALSP35858 605 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 ADKP55263 362 aaKnown RBP11.52□□□□□ -0.57
SIL1-208ENST00000505945 JAM2P57087 298 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 ERVPABLB-1P60509 514 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 KRT31Q15323 416 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 NR0B2Q15466 257 aa11.52□□□□□ -0.57
SIL1-208ENST00000505945 PRRT3Q5FWE3 981 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms