RNA–Protein interactions for RNA: ENST00000505073.5

CCSER1-205, Transcript of coiled-coil serine rich protein 1, humanhuman

TSL 1 (best)

Gene CCSER1, Length 2,684 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1-205ENST00000505073 ZNF419Q96HQ0 510 aaPredicted RBP13.4□□□□□ -0.26
CCSER1-205ENST00000505073 C7orf26Q96N11 449 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 ZBED2Q9BTP6 218 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 ZYG11BQ9C0D3 744 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 WWP1Q9H0M0 922 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 EBF3Q9H4W6 596 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 OCEL1Q9H607 264 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 ZDHHC7Q9NXF8 308 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 UBP1Q9NZI7 540 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 TTLL3Q9Y4R7 772 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 PCDHB12Q9Y5F1 795 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 DOCK4Q8N1I0 1966 aa13.4□□□□□ -0.26
CCSER1-205ENST00000505073 NYNRINQ9P2P1 1898 aaKnown RBP13.4□□□□□ -0.27
CCSER1-205ENST00000505073 ARHGAP42A6NI28 874 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 MTSS1O43312 755 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 PENKP01210 267 aaPredicted RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 PABPC4LP0CB38 370 aaKnown RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 NUMBP49757 651 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 KDSRQ06136 332 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TBCCQ15814 346 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 KBTBD12Q3ZCT8 623 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 UNC5AQ6ZN44 842 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 LZTR1Q8N653 840 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 SLC44A1Q8WWI5 657 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TEKT5Q96M29 485 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 EBNA1BP2Q99848 306 aaKnown RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 MLPHQ9BV36 600 aaPredicted RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 GBA3Q9H227 469 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 EIF2B3Q9NR50 452 aaKnown RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 DNMT3LQ9UJW3 386 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 COCHO43405 550 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 INHBAP08476 426 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 LINC00271P0C7V0 271 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 CCNCP24863 283 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 MGAT1P26572 445 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 RING1Q06587 406 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 CBLBQ13191 982 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 HSF5Q4G112 596 aaPredicted RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 HECTD3Q5T447 861 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 AFMIDQ63HM1 303 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 CASC4Q6P4E1 433 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 LRRC8BQ6P9F7 803 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 AAGABQ6PD74 315 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 PDSS2Q86YH6 399 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TRIM42Q8IWZ5 723 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 FIBCD1Q8N539 461 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 OR52K1Q8NGK4 314 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 NAT14Q8WUY8 206 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 RPRD1AQ96P16 312 aaPredicted RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TSGA13Q96PP4 275 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 IQCGQ9H095 443 aaKnown RBP13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TRPM5Q9NZQ8 1165 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TRHDEQ9UKU6 1024 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 TMCO1Q9UM00 188 aa13.39□□□□□ -0.27
CCSER1-205ENST00000505073 WASH4PA8MWX3 477 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 PIM1P11309 404 aaPredicted RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 ETS2P15036 469 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 RHOQP17081 205 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 PPM1AP35813 382 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 PDZD8Q8NEN9 1154 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 LRRC39Q96DD0 335 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 CEP295NLQ96MC4 621 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 SRPK1Q96SB4 655 aaKnown RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 APOL2Q9BQE5 337 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 GKN1Q9NS71 199 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 PRKAG2Q9UGJ0 569 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 C2orf78A6NCI8 922 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 COPEO14579 308 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 ATP5BP06576 529 aaKnown RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 FPGSQ05932 587 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 CDK18Q07002 472 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 PPIGQ13427 754 aaKnown RBP eCLIP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 VEPH1Q14D04 833 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 ITPRIPL1Q6GPH6 555 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 TRMT10BQ6PF06 316 aaKnown RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 DNAJB7Q7Z6W7 309 aaPredicted RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 DHDDSQ86SQ9 333 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 RASSF3Q86WH2 238 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 ARID3BQ8IVW6 561 aaPredicted RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 KLHL23Q8NBE8 558 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 HMCESQ96FZ2 354 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 VAT1Q99536 393 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 RNF38Q9H0F5 515 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 ZBP1Q9H171 429 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 C1orf21Q9H246 121 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 TMEM248Q9NWD8 314 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 HSFX1Q9UBD0 423 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 IPO11Q9UI26 975 aaKnown RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 HBS1LQ9Y450 684 aaKnown RBP13.38□□□□□ -0.27
CCSER1-205ENST00000505073 INSL5Q9Y5Q6 135 aa13.38□□□□□ -0.27
CCSER1-205ENST00000505073 IGLV3-10A0A075B6K4 115 aa13.37□□□□□ -0.27
CCSER1-205ENST00000505073 CXorf49A8MYA2 514 aaPredicted RBP13.37□□□□□ -0.27
CCSER1-205ENST00000505073 LILRB3O75022 631 aa13.37□□□□□ -0.27
CCSER1-205ENST00000505073 ZNF189O75820 626 aaPredicted RBP13.37□□□□□ -0.27
CCSER1-205ENST00000505073 AP2A1O95782 977 aa13.37□□□□□ -0.27
CCSER1-205ENST00000505073 CNPP09543 421 aaKnown RBP13.37□□□□□ -0.27
CCSER1-205ENST00000505073 IRF1P10914 325 aa13.37□□□□□ -0.27
CCSER1-205ENST00000505073 TACR2P21452 398 aa13.37□□□□□ -0.27
CCSER1-205ENST00000505073 HTRA4P83105 476 aaPredicted RBP13.37□□□□□ -0.27
CCSER1-205ENST00000505073 BST1Q10588 318 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms