RNA–Protein interactions for RNA: ENST00000505010.5

TPM3-218, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 540 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-218ENST00000505010 CDC42EP4Q9H3Q1 356 aaKnown RBP9.49□□□□□ -0.89
TPM3-218ENST00000505010 LRRC40Q9H9A6 602 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 TRPV4Q9HBA0 871 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 ZFP14Q9HCL3 533 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 XAB2Q9HCS7 855 aaKnown RBP9.49□□□□□ -0.89
TPM3-218ENST00000505010 ABCB8Q9NUT2 735 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 THG1LQ9NWX6 298 aaKnown RBP9.49□□□□□ -0.89
TPM3-218ENST00000505010 OBP2AQ9NY56 170 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 NINJ2Q9NZG7 142 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 UBP1Q9NZI7 540 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 SEPT3Q9UH03 358 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 VPS51Q9UID3 782 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 GGA2Q9UJY4 613 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 RALYQ9UKM9 306 aaKnown RBP9.49□□□□□ -0.89
TPM3-218ENST00000505010 ACTL7AQ9Y615 435 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 USP24Q9UPU5 2620 aa9.49□□□□□ -0.89
TPM3-218ENST00000505010 ERI2A8K979 691 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 EIF3HO15372 352 aaKnown RBP eCLIP9.48□□□□□ -0.89
TPM3-218ENST00000505010 PSMD3O43242 534 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 USP12O75317 370 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 AVILO75366 819 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PMPCBO75439 489 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 ZMPSTE24O75844 475 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 SASH3O75995 380 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 TMCC1O94876 653 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 ACSL3O95573 720 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 CPP00450 1065 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PABPC1P11940 636 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 LAMP2P13473 410 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 HLA-FP30511 346 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 CD86P42081 329 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 GEMP55040 296 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 GEMIN4P57678 1058 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 STARD6P59095 220 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 CDK16Q00536 496 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 DMWDQ09019 674 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 OLIG2Q13516 323 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 RFTN1Q14699 578 aaPredicted RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 FASTKD3Q14CZ7 662 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 PDGFRLQ15198 375 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PCSK7Q16549 785 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PLEKHG6Q3KR16 790 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 FUT11Q495W5 492 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 MSS51Q4VC12 460 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PPM1JQ5JR12 505 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 RETSATQ6NUM9 610 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 VITQ6UXI7 678 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 ZNF534Q76KX8 674 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 TRMT10CQ7L0Y3 403 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 ANKMY2Q8IV38 441 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PGBD5Q8N414 524 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 NAT16Q8N8M0 369 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 SPATA22Q8NHS9 363 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 ALG14Q96F25 216 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 EXOC2Q96KP1 924 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 C9orf72Q96LT7 481 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 XPO6Q96QU8 1125 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 RUFY1Q96T51 708 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 SEMA3CQ99985 751 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 TBL1YQ9BQ87 522 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 FICDQ9BVA6 458 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PHACTR1Q9C0D0 580 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PABPC3Q9H361 631 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 EBF3Q9H4W6 596 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 SLC2A4RGQ9NR83 387 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 PIH1D1Q9NWS0 290 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 ZSCAN32Q9NX65 697 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 SMG5Q9UPR3 1016 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 CHMP2BQ9UQN3 213 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 AAR2Q9Y312 384 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 OR51B4Q9Y5P0 310 aa9.48□□□□□ -0.89
TPM3-218ENST00000505010 DYNC1LI1Q9Y6G9 523 aaKnown RBP9.48□□□□□ -0.89
TPM3-218ENST00000505010 MUC22E2RYF6 1773 aaPredicted RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 KANSL1LA0AUZ9 987 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 TTC24A2A3L6 582 aaPredicted RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 E7ESA3 106 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 MUSKO15146 869 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 HOXC11O43248 304 aaPredicted RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 RIPK2O43353 540 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 ATP8B1O43520 1251 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 CACNG3O60359 315 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 GJB3O75712 270 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 SUN1O94901 812 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 MT-CYBP00156 380 aaPredicted RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 GRIA1P42261 906 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 SERPINH1P50454 418 aaKnown RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 SESN2P58004 480 aaPredicted RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 RHOAP61586 193 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 TNK2Q07912 1038 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 NIPAL4Q0D2K0 466 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 MPP3Q13368 585 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 SLC12A1Q13621 1099 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 CYTH1Q15438 398 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 KYNUQ16719 465 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 SPDYCQ5MJ68 293 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 UBAP2Q5T6F2 1119 aaKnown RBP9.47□□□□□ -0.89
TPM3-218ENST00000505010 NAPEPLDQ6IQ20 393 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 LRRC8BQ6P9F7 803 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 PARM1Q6UWI2 310 aa9.47□□□□□ -0.89
TPM3-218ENST00000505010 CAPN12Q6ZSI9 719 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms