RNA–Protein interactions for RNA: ENST00000504663.1

TPM3-217, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 870 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-217ENST00000504663 ECT2Q9H8V3 914 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ARNT2Q9HBZ2 717 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 NOD2Q9HC29 1040 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 ZFP14Q9HCL3 533 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 SMYD2Q9NRG4 433 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 VPS45Q9NRW7 570 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 CD207Q9UJ71 328 aa10.53□□□□□ -0.72
TPM3-217ENST00000504663 E7EVH7 732 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 MBTPS2O43462 519 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 FZD6O60353 706 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 PMPCBO75439 489 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 TCEA3O75764 348 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 NFATC1O95644 943 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 ADH1CP00326 375 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 IGFBP4P22692 258 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 SSTR1P30872 391 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 SLC6A11P48066 632 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 TRAF2Q12933 501 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 PTPRNQ16849 979 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 TTMPQ5BVD1 217 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 DGKKQ5KSL6 1271 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 CERCAMQ5T4B2 595 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 CFAP58Q5T655 872 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 MBLAC2Q68D91 279 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 UNC5AQ6ZN44 842 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 CEP128Q6ZU80 1094 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 RNF135Q8IUD6 432 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 MICALL1Q8N3F8 863 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 SH2D3CQ8N5H7 860 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.52□□□□□ -0.73
TPM3-217ENST00000504663 NAT16Q8N8M0 369 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 ATP11CQ8NB49 1132 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 FRS2Q8WU20 508 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 NXPE3Q969Y0 559 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 ARL8AQ96BM9 186 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 LRRC39Q96DD0 335 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 FEM1CQ96JP0 617 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 TTC25Q96NG3 672 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 NECTIN4Q96NY8 510 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 CDX2Q99626 313 aaPredicted RBP10.52□□□□□ -0.73
TPM3-217ENST00000504663 EBNA1BP2Q99848 306 aaKnown RBP10.52□□□□□ -0.73
TPM3-217ENST00000504663 DHRS4Q9BTZ2 278 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 CINPQ9BW66 212 aaPredicted RBP10.52□□□□□ -0.73
TPM3-217ENST00000504663 TDRD1Q9BXT4 1180 aaKnown RBP10.52□□□□□ -0.73
TPM3-217ENST00000504663 UBE2ZQ9H832 354 aaPredicted RBP10.52□□□□□ -0.73
TPM3-217ENST00000504663 RABGEF1Q9UJ41 708 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 AAR2Q9Y312 384 aaKnown RBP10.52□□□□□ -0.73
TPM3-217ENST00000504663 NUMBLQ9Y6R0 609 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 BPTFQ12830 3046 aa10.52□□□□□ -0.73
TPM3-217ENST00000504663 CKAP5Q14008 2032 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 ZCWPW2A0A1B0GU75 182 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 TCRBV9S1A1TA0A576 114 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 GOLGA6BA6NDN3 693 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 C2CD4DB7Z1M9 353 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 PRRT4C9JH25 899 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 TRAFD1O14545 582 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 PSMD3O43242 534 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 ALDH1A2O94788 518 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 PSMC3P17980 439 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 GBP2P32456 591 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 GJA4P35212 333 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 CSNK1DP48730 415 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SESN2P58004 480 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 NSUN2Q08J23 767 aaKnown RBP eCLIP10.51□□□□□ -0.73
TPM3-217ENST00000504663 CDH17Q12864 832 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SMAD4Q13485 552 aaKnown RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 RUNX3Q13761 415 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 PRPSAP1Q14558 356 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 DMC1Q14565 340 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SLC1A5Q15758 541 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 DNAJC21Q5F1R6 531 aaKnown RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 SIRPB2Q5JXA9 342 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 ATXN7L2Q5T6C5 722 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 DENND2CQ68D51 928 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 NAPEPLDQ6IQ20 393 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 C22orf39Q6P5X5 142 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 TRMT10BQ6PF06 316 aaKnown RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 TMEM135Q86UB9 458 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 CCDC117Q8IWD4 279 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 UNC5BQ8IZJ1 945 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 AHI1Q8N157 1196 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 EPS8L3Q8TE67 593 aaKnown RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 NSMCE1Q8WV22 266 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SORCS1Q8WY21 1168 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 EZH1Q92800 747 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 ATP2A3Q93084 1043 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 E2F7Q96AV8 911 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 FCRL3Q96P31 734 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 PPP1R2P1Q96PQ5 205 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SMIM14Q96QK8 99 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 GAS2L1Q99501 681 aaPredicted RBP10.51□□□□□ -0.73
TPM3-217ENST00000504663 ACSS3Q9H6R3 686 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 TMBIM4Q9HC24 238 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 GTSE1Q9NYZ3 720 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SOX13Q9UN79 622 aa10.51□□□□□ -0.73
TPM3-217ENST00000504663 SHISA7A6NL88 538 aa10.5□□□□□ -0.73
TPM3-217ENST00000504663 CXorf49A8MYA2 514 aaPredicted RBP10.5□□□□□ -0.73
TPM3-217ENST00000504663 HTRA2O43464 458 aaPredicted RBP10.5□□□□□ -0.73
TPM3-217ENST00000504663 ATP9BO43861 1147 aa10.5□□□□□ -0.73
TPM3-217ENST00000504663 PIAS1O75925 651 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms