RNA–Protein interactions for RNA: ENST00000504489.3

PDLIM5-208, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4 BASIC

Gene PDLIM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-208ENST00000504489 CES1P23141 567 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 OXTRP30559 389 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 MAPK8P45983 427 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 RGRP47804 291 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 PSMD8P48556 350 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 GNG11P61952 73 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 SLC45A4Q5BKX6 768 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ALG1LQ6GMV1 187 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 KBTBD6Q86V97 674 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 C11orf74Q86VG3 221 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ZC3H18Q86VM9 953 aaKnown RBP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 PGBD5Q8N414 524 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 OR6K2Q8NGY2 324 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 LRRN4Q8WUT4 740 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 RLN3Q8WXF3 142 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 FAM131CQ96AQ9 280 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 TRIM44Q96DX7 344 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ZNF419Q96HQ0 510 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 EXOC2Q96KP1 924 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 SPACA7Q96KW9 195 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 QKIQ96PU8 341 aaKnown RBP eCLIP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 NUDCD1Q96RS6 583 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 TUBGCP5Q96RT8 1024 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ZDHHC6Q9H6R6 413 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 NT5MQ9NPB1 228 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 FBXL12Q9NXK8 326 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 EVLQ9UI08 416 aaPredicted RBP12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 NCKAP1Q9Y2A7 1128 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ATP8A1Q9Y2Q0 1164 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 VPS13AQ96RL7 3174 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 CACNA1EQ15878 2313 aa12.06□□□□□ -0.48
PDLIM5-208ENST00000504489 ADAMTS9Q9P2N4 1935 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 IGHV1OR15-9A0A0B4J2B8 117 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 BCLAF3A2AJT9 711 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 H7C0C1 242 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 RNF103O00237 685 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 KPNA3O00505 521 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CES2O00748 559 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 INSIG1O15503 277 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CEP104O60308 925 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 ZNF189O75820 626 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 NEBLO76041 1014 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 JCHAINP01591 159 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 RBP3P10745 1247 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 PRLRP16471 622 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 ITGB7P26010 798 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CXCR5P32302 372 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 DRD3P35462 400 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 ATP5OP48047 213 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 SCNN1BP51168 640 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 EIF3EP60228 445 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 AP1S1P61966 158 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CCDC15Q0P6D6 951 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 TEX44Q53QW1 395 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 ZNF805Q5CZA5 627 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 C6orf132Q5T0Z8 1188 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 NCEH1Q6PIU2 408 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 GDPD4Q6W3E5 623 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 SLC36A4Q6YBV0 504 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 B4GALNT4Q76KP1 1039 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CACUL1Q86Y37 369 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 C17orf53Q8N3J3 647 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 RASGEF1CQ8N431 466 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 HDDC3Q8N4P3 179 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 AADATQ8N5Z0 425 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CNTD1Q8N815 330 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 SLC35B2Q8TB61 432 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 GRIN3AQ8TCU5 1115 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 HCAR2Q8TDS4 363 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 MAIP1Q8WWC4 291 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 PPP1R16AQ96I34 528 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 ZNF641Q96N77 438 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 WDR24Q96S15 920 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 VAT1Q99536 393 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 OMDQ99983 421 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 FRMD8P1Q9BZ68 369 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 POLR1EQ9GZS1 481 aaKnown RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CD93Q9NPY3 652 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 WSB2Q9NYS7 404 aaPredicted RBP12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 FZD4Q9ULV1 537 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 SNX12Q9UMY4 172 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 CYP8B1Q9UNU6 501 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 ZKSCAN5Q9Y2L8 839 aa12.05□□□□□ -0.48
PDLIM5-208ENST00000504489 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 A0A1W2PP55 124 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 BHMG1C9JSJ3 638 aaPredicted RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SLC7A4O43246 635 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 RNASEH2AO75792 299 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 HLA-DQB2P05538 268 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 PTPN3P26045 913 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 CD6P30203 668 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 GKP32189 559 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 NBL1P41271 181 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 METAP1P53582 386 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 MAXP61244 160 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 WASHC5Q12768 1159 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 CNTN1Q12860 1018 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 ZBTB17Q13105 803 aa12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SRSF5Q13243 272 aaKnown RBP12.04□□□□□ -0.48
PDLIM5-208ENST00000504489 SIX1Q15475 284 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms