RNA–Protein interactions for RNA: ENST00000504120.3

PCDHA1-203, Transcript of protocadherin alpha 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCDHA1, Length 5,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-203ENST00000504120 CRELD2Q6UXH1 353 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 PACS2Q86VP3 889 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 NACC2Q96BF6 587 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 FHDC1Q9C0D6 1143 aaPredicted RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 RNPEPQ9H4A4 650 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 QSOX1O00391 747 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 PSME3P61289 254 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 LIPMQ5VYY2 423 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 DCLRE1AQ6PJP8 1040 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 TXNDC11Q6PKC3 985 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 ELMO1Q92556 727 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 MTFMTQ96DP5 389 aaKnown RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 PTCD3Q96EY7 689 aaKnown RBP16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 LRMDAQ9H2I8 198 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 TMEM191CA6NGB0 347 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 PTGES3LE9PB15 166 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 B4GALT5O43286 388 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 SERPINA6P08185 405 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 NTSP30990 170 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 HSPA14Q0VDF9 509 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 MAP2K5Q13163 448 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 KCTD4Q8WVF5 259 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 LGMNQ99538 433 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 TBC1D10AQ9BXI6 508 aa16.68■□□□□ 0.26
PCDHA1-203ENST00000504120 KPNA4O00629 521 aaPredicted RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 BANF1O75531 89 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 ATP6V0D1P61421 351 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 HLA-DQA1Q5Y7H0 255 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TRIQKQ629K1 86 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 CDC73Q6P1J9 531 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 POTEHQ6S545 545 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 C6orf62Q9GZU0 229 aaPredicted RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 PEX11AO75192 247 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TTKP33981 857 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 GSTA3Q16772 222 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 INSCQ1MX18 579 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 CRY2Q49AN0 593 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 BRMS1LQ5PSV4 323 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 PDZK1Q5T2W1 519 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 EEF1DP3Q658K8 133 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 RASGEF1CQ8N431 466 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 DAPK2Q9UIK4 370 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 SMIM31A0A1B0GVY4 71 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TRIM38O00635 465 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 MAGEC1O60732 1142 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 VAV1P15498 845 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 ABL2P42684 1182 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TNK2Q07912 1038 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 PPP1R15BQ5SWA1 713 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TEKT5Q96M29 485 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 PAIP1Q9H074 479 aaKnown RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 RPS6KA6Q9UK32 745 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TCRBV9S1A1TA0A576 114 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 YDJCA8MPS7 323 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 ULK1O75385 1050 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 HDCP19113 662 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 GSSP48637 474 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 HIRAP54198 1017 aaPredicted RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 PPP1R26Q5T8A7 1209 aaPredicted RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 TTC23Q5W5X9 447 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 NEK10Q6ZWH5 1172 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 ADAMTSL2Q86TH1 951 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 DCUN1D5Q9BTE7 237 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 RPL26L1Q9UNX3 145 aaKnown RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 EFR3BQ9Y2G0 817 aa16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 REXO2Q9Y3B8 237 aaKnown RBP16.67■□□□□ 0.26
PCDHA1-203ENST00000504120 COL1A2P08123 1366 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 SLC28A1O00337 649 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 NUP62P37198 522 aaPredicted RBP16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 ST13P50502 369 aaKnown RBP16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 PTPRNQ16849 979 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 FBXO30Q8TB52 745 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 HELQQ8TDG4 1101 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 ALG3Q92685 438 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 BUD23O43709 281 aaKnown RBP16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 TRAF3Q13114 568 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 TIMM50Q3ZCQ8 353 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 HJURPQ8NCD3 748 aaPredicted RBP16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 OLFM1Q99784 485 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 OSBPL6Q9BZF3 934 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 HDHD2Q9H0R4 259 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 FBXO10Q9UK96 956 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 GRIA3P42263 894 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 HDDC2Q7Z4H3 204 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 FAM35AQ86V20 835 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 DENND1CQ8IV53 801 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 FBXW8Q8N3Y1 598 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 ANKRD49Q8WVL7 239 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 NDNQ99608 321 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 SNX15Q9NRS6 342 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 FBXO5Q9UKT4 447 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 PSME2Q9UL46 239 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 ST3GAL5Q9UNP4 418 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 PCDHAC2Q9Y5I4 1007 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 RPL3P39023 403 aaKnown RBP16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 BNIP2Q12982 314 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 TRIM25Q14258 630 aaKnown RBP16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 SLC9A5Q14940 896 aa16.66■□□□□ 0.26
PCDHA1-203ENST00000504120 MAPKAPK3Q16644 382 aa16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms