RNA–Protein interactions for RNA: ENST00000502316.5

RNF4-202, Transcript of ring finger protein 4, humanhuman

TSL 2

Gene RNF4, Length 855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-202ENST00000502316 NSMCE3Q96MG7 304 aa14.35□□□□□ -0.11
RNF4-202ENST00000502316 ZNF641Q96N77 438 aaPredicted RBP14.35□□□□□ -0.11
RNF4-202ENST00000502316 WDR24Q96S15 920 aa14.35□□□□□ -0.11
RNF4-202ENST00000502316 HDAC8Q9BY41 377 aa14.35□□□□□ -0.11
RNF4-202ENST00000502316 NT5MQ9NPB1 228 aa14.35□□□□□ -0.11
RNF4-202ENST00000502316 NCKAP1Q9Y2A7 1128 aa14.35□□□□□ -0.11
RNF4-202ENST00000502316 R3HDM2Q9Y2K5 976 aaKnown RBP14.35□□□□□ -0.11
RNF4-202ENST00000502316 TSPAN11A1L157 253 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 BCLAF3A2AJT9 711 aaKnown RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 CES2O00748 559 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 GJB3O75712 270 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 RNASEH2AO75792 299 aaKnown RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 ZNF189O75820 626 aaPredicted RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 UGT2B4P06133 528 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 RBP3P10745 1247 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 BCKDHBP21953 392 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 CES1P23141 567 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 PTPN3P26045 913 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 CXCR5P32302 372 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 SCNN1BP51168 640 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 EIF3EP60228 445 aaKnown RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 MAXP61244 160 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 WASHC5Q12768 1159 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 CNTN1Q12860 1018 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 SIX1Q15475 284 aaPredicted RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 TEX44Q53QW1 395 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 SPDYCQ5MJ68 293 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 PIP5KL1Q5T9C9 394 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 NCEH1Q6PIU2 408 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 B4GALNT4Q76KP1 1039 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 ERN2Q76MJ5 926 aaKnown RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 CDKL3Q8IVW4 592 aaPredicted RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 C17orf53Q8N3J3 647 aaPredicted RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 SLC35B2Q8TB61 432 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 ECHDC3Q96DC8 303 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 TOE1Q96GM8 510 aaKnown RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 PBKQ96KB5 322 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 VAT1Q99536 393 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 OMDQ99983 421 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 FRMD8P1Q9BZ68 369 aaPredicted RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 BTBD1Q9H0C5 482 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 NEUROG2Q9H2A3 272 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 SEMA4AQ9H3S1 761 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 ATP13A3Q9H7F0 1226 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 SGK2Q9HBY8 427 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 NOD2Q9HC29 1040 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 DKK3Q9UBP4 350 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 TTC7AQ9ULT0 858 aaPredicted RBP14.34□□□□□ -0.11
RNF4-202ENST00000502316 SNX12Q9UMY4 172 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 INVSQ9Y283 1065 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 GPR179Q6PRD1 2367 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 LAMA1P25391 3075 aa14.34□□□□□ -0.11
RNF4-202ENST00000502316 SPAG17Q6Q759 2223 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 PROB1E7EW31 1015 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 H7C0C1 242 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 TRAFD1O14545 582 aaPredicted RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 FANCGO15287 622 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 PLRG1O43660 514 aaKnown RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 CEP104O60308 925 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 SOCS5O75159 536 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 NEBLO76041 1014 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 PIGNO95427 931 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 FGGP02679 453 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 RBL1P28749 1068 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 SERPINA4P29622 427 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 ACSL1P33121 698 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 ATP5OP48047 213 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 NEK3P51956 506 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 ADPRHP54922 357 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 NHLH1Q02575 133 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 BCL2L1Q07817 233 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 CCDC15Q0P6D6 951 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 SIM2Q14190 667 aaPredicted RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 POM121L1PQ3SYA9 428 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 PLK5Q496M5 336 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 PAPD7Q5XG87 772 aaKnown RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 PMS2CLQ68D20 193 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 PARS2Q7L3T8 475 aaKnown RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 CADM4Q8NFZ8 388 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 ARRDC2Q8TBH0 407 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 MAIP1Q8WWC4 291 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 TEKT5Q96M29 485 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 KLHL32Q96NJ5 620 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 OSBPL9Q96SU4 736 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 SEMA3CQ99985 751 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 FAM118BQ9BPY3 351 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 PCED1AQ9H1Q7 454 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 DUSP15Q9H1R2 295 aaPredicted RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 KDM4CQ9H3R0 1056 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 SUV39H2Q9H5I1 410 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 USP29Q9HBJ7 922 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 SCUBE2Q9NQ36 999 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 DYRK4Q9NR20 520 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 FAM86C1Q9NVL1 165 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.33□□□□□ -0.12
RNF4-202ENST00000502316 SEPT10Q9P0V9 454 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 RAPGEFL1Q9UHV5 662 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 ZKSCAN5Q9Y2L8 839 aa14.33□□□□□ -0.12
RNF4-202ENST00000502316 NUMA1Q14980 2115 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms