RNA–Protein interactions for RNA: ENST00000502313.1

HMGB1P21-201, Transcript of high mobility group box 1 pseudogene 21, humanhuman

BASIC

Gene HMGB1P21, Length 581 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P21-201ENST00000502313 C2CD2Q9Y426 696 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 ENTPD2Q9Y5L3 495 aa4.47□□□□□ -1.69
HMGB1P21-201ENST00000502313 KDM6AO15550 1401 aaPredicted RBP4.46□□□□□ -1.69
HMGB1P21-201ENST00000502313 CICQ96RK0 1608 aaPredicted RBP4.46□□□□□ -1.69
HMGB1P21-201ENST00000502313 LY75O60449 1722 aa4.46□□□□□ -1.69
HMGB1P21-201ENST00000502313 MRC1P22897 1456 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ATRNL1Q5VV63 1379 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 A0A1W2PRX2 142 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 TRBC2A0A5B9 178 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SYCE3A1L190 88 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SMIM30A4D0T7 59 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 C9orf118A6NHY6 69 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 C2orf81A6NN90 581 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 UBXN8O00124 270 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SNAP23O00161 211 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 AP3B1O00203 1094 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CACNB4O00305 520 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SPRY1O43609 319 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PEX11AO75192 247 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 VPS4BO75351 444 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PLA2G1BP04054 148 aaKnown RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF888P0CJ79 500 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 GZMAP12544 262 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 HGFP14210 728 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 TYMPP19971 482 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FDXRP22570 491 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PTPN3P26045 913 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PPP2R1AP30153 589 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CSF2RBP32927 897 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 MC5RP33032 325 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PSMC4P43686 418 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 IFNAR2P48551 515 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SULT1E1P49888 294 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 HNMTP50135 292 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 STAT2P52630 851 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 MFAP4P55083 255 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 EIF3BP55884 814 aaKnown RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 RAP2BP61225 183 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 TUBB4BP68371 445 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM189BP81408 668 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 MECOMQ03112 1051 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLFN5Q08AF3 891 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 NPRL3Q12980 569 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ALCAMQ13740 583 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 BMPR2Q13873 1038 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FRG1Q14331 258 aaKnown RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PDK1Q15118 436 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 LETM2Q2VYF4 491 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 LEXMQ3ZCV2 418 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF385BQ569K4 471 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 IGSF11Q5DX21 431 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 DCAF17Q5H9S7 520 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 UTP14CQ5TAP6 766 aaKnown RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF529Q6P280 563 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 GBP6Q6ZN66 633 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF572Q7Z3I7 529 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CMTM4Q8IZR5 234 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM185AQ8N0U4 392 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 GMCL1P1Q8NEA9 526 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ABHD5Q8WTS1 349 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 GIMAP1Q8WWP7 306 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ARRDC3Q96B67 414 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 RNFT2Q96EX2 444 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 KLHL15Q96M94 604 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 DGAT2Q96PD7 388 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 GAD1Q99259 594 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CD180Q99467 661 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC38A3Q99624 504 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM118BQ9BPY3 351 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CLSTN3Q9BQT9 956 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SYT17Q9BSW7 474 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 HEMGNQ9BXL5 484 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 TTYH3Q9C0H2 523 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 SLC5A7Q9GZV3 580 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 KATNBL1Q9H079 304 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM83DQ9H4H8 585 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 DNAJC18Q9H819 358 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 KCNK12Q9HB15 430 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 IL1RAPL2Q9NP60 686 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 IL23AQ9NPF7 189 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 RLIMQ9NVW2 624 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 AATFQ9NY61 560 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 HCN3Q9P1Z3 774 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 IL19Q9UHD0 177 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 RAB21Q9UL25 225 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 PPIEQ9UNP9 301 aaKnown RBP4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 USP22Q9UPT9 525 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 AURKCQ9UQB9 309 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CDYLQ9Y232 598 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZBTB1Q9Y2K1 713 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 KIF3AQ9Y496 699 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CDY1Q9Y6F8 540 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 CAPN7Q9Y6W3 813 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZBED9Q6R2W3 1325 aa4.46□□□□□ -1.7
HMGB1P21-201ENST00000502313 ZNF831Q5JPB2 1677 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 COL15A1P39059 1388 aa4.45□□□□□ -1.7
HMGB1P21-201ENST00000502313 BTAF1O14981 1849 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms