RNA–Protein interactions for RNA: ENST00000498525.5

CDK5RAP1-216, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 5

Gene CDK5RAP1, Length 777 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-216ENST00000498525 TCEAL2Q9H3H9 227 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP1-216ENST00000498525 TMEM63CQ9P1W3 806 aa12.34□□□□□ -0.43
CDK5RAP1-216ENST00000498525 PNMA8BQ9ULN7 279 aaPredicted RBP12.34□□□□□ -0.43
CDK5RAP1-216ENST00000498525 HPCAL4Q9UM19 191 aa12.34□□□□□ -0.43
CDK5RAP1-216ENST00000498525 COQ6Q9Y2Z9 468 aa12.34□□□□□ -0.43
CDK5RAP1-216ENST00000498525 BAHCC1Q9P281 2608 aa12.34□□□□□ -0.43
CDK5RAP1-216ENST00000498525 ATRXP46100 2492 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 LY6G6EA0A0G2JKS1 128 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 LRRC10BA6NIK2 292 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 RASA4BC9J798 803 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 NEMP1O14524 444 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 RASA4O43374 803 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PIGNO95427 931 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 GSRP00390 522 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PRKCGP05129 697 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 C1SP09871 688 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ACP1P24666 158 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 HNF1BP35680 557 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ZNF143P52747 638 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 GSCP56915 257 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SNRPD1P62314 119 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TYRO3Q06418 890 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SGCGQ13326 291 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ZNF211Q13398 564 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PDE1CQ14123 709 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CYTH1Q15438 398 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ANO6Q4KMQ2 910 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 EFHC2Q5JST6 749 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 E4F1Q66K89 784 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 KIAA1161Q6NSJ0 714 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 GDPD4Q6W3E5 623 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TTC7BQ86TV6 843 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 VPS36Q86VN1 386 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 RBFAQ8N0V3 343 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 RTL3Q8N8U3 475 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ANKRD20A12PQ8NF67 263 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ISG20Q96AZ6 181 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CELF6Q96J87 481 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 APOLD1Q96LR9 279 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 BBC3Q96PG8 261 aaPredicted RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 WRAP53Q9BUR4 548 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 C1QTNF2Q9BXJ5 285 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TRIM7Q9C029 511 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 MBNL1Q9NR56 388 aaKnown RBP12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 LHX3Q9UBR4 397 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PCDHB1Q9Y5F3 818 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 HS3ST3A1Q9Y663 406 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 U3KQA8 63 aa12.33□□□□□ -0.44
CDK5RAP1-216ENST00000498525 J3KR12 359 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SCAMP1O15126 338 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 AP1G1O43747 822 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 POP4O95707 220 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TIMP2P16035 220 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TNFAIP3P21580 790 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 IGFALSP35858 605 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ETFBP38117 255 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 RHOAP61586 193 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 C1QBPQ07021 282 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 EIF2B5Q13144 721 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 C1orf61Q13536 156 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 DEFB133Q30KQ1 61 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CCDC183Q5T5S1 534 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 DCUN1D2Q6PH85 259 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CRTC1Q6UUV9 634 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 KYAT3Q6YP21 454 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ARFGAP1Q8N6T3 406 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PEBP4Q96S96 227 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SYT11Q9BT88 431 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TTYH3Q9C0H2 523 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 GPR27Q9NS67 375 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TMEM51Q9NW97 253 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 DKK4Q9UBT3 224 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PCSK1NQ9UHG2 260 aa12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 IPO11Q9UI26 975 aaKnown RBP12.32□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SPTY2D1-AS1A0A0U1RR47 76 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 LRRC53A6NM62 1247 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 K7ESM1 405 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 FPGTO14772 594 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TSPAN6O43657 245 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 MT-CO3P00414 261 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CSF2P04141 144 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SKILP12757 684 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 FERP16591 822 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 EIF2S3P41091 472 aaKnown RBP12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 RGRP47804 291 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SERINC3Q13530 473 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CDKN3Q16667 212 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 KLHL40Q2TBA0 621 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SOWAHCQ53LP3 525 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ARHGAP36Q6ZRI8 547 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 TP53INP2Q8IXH6 220 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 PLPP6Q8IY26 295 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 ZNF548Q8NEK5 533 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 LMX1AQ8TE12 382 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CENPTQ96BT3 561 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 GDAP1L1Q96MZ0 367 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 NAP1L5Q96NT1 182 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 KCTD15Q96SI1 283 aaPredicted RBP12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 CNPY3Q9BT09 278 aa12.31□□□□□ -0.44
CDK5RAP1-216ENST00000498525 SLC39A8Q9C0K1 460 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms