RNA–Protein interactions for RNA: ENST00000498431.5

MUC1-220, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 667 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-220ENST00000498431 UBR5O95071 2799 aaPredicted RBP16.32■□□□□ 0.2
MUC1-220ENST00000498431 SNX16P57768 344 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 SLC20A2Q08357 652 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 RAB6CQ53S08 254 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 C6orf132Q5T0Z8 1188 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 FAM102AQ5T9C2 384 aaPredicted RBP16.32■□□□□ 0.2
MUC1-220ENST00000498431 ZNF783Q6ZMS7 281 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 CCDC81Q6ZN84 652 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 BNIPLQ7Z465 357 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 B3GNT8Q7Z7M8 397 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 FAM131BQ86XD5 332 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 XYLT1Q86Y38 959 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 IRF2BP1Q8IU81 584 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 ZDHHC17Q8IUH5 632 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 PHACTR4Q8IZ21 702 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 ARL14Q8N4G2 192 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 DENND6BQ8NEG7 585 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 CENPTQ96BT3 561 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 CCDC97Q96F63 343 aaPredicted RBP16.32■□□□□ 0.2
MUC1-220ENST00000498431 ZYG11BQ9C0D3 744 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 RAB6CQ9H0N0 254 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 SYNDIG1Q9H7V2 258 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 SPASTQ9UBP0 616 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 RABGEF1Q9UJ41 708 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 DNAJC12Q9UKB3 198 aa16.32■□□□□ 0.2
MUC1-220ENST00000498431 CHD5Q8TDI0 1954 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 LMO7DNF2Z398 122 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 NEMP1O14524 444 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 YY2O15391 372 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 F9P00740 461 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 UGT2B4P06133 528 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 TSHRP16473 764 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 GABRB2P47870 512 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 SRSF6Q13247 344 aaKnown RBP16.31■□□□□ 0.2
MUC1-220ENST00000498431 TCEA2Q15560 299 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 ARL13BQ3SXY8 428 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 ZNF805Q5CZA5 627 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 LEKR1Q6ZMV7 388 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 VPS36Q86VN1 386 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 RYBPQ8N488 228 aaPredicted RBP16.31■□□□□ 0.2
MUC1-220ENST00000498431 EXD3Q8N9H8 876 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 BTN2A2Q8WVV5 523 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 ASB12Q8WXK4 309 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 CFAP57Q96MR6 1250 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 HAPLN3Q96S86 360 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 MBNL1Q9NR56 388 aaKnown RBP16.31■□□□□ 0.2
MUC1-220ENST00000498431 PAXBP1Q9Y5B6 917 aa16.31■□□□□ 0.2
MUC1-220ENST00000498431 CCDC187A0A096LP49 1063 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 GOLGA8SH3BPF8 625 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 KRIT1O00522 736 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 NTN3O00634 580 aaPredicted RBP16.3■□□□□ 0.2
MUC1-220ENST00000498431 AREL1O15033 823 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 ITGA2BP08514 1039 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 ITIH2P19823 946 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 CDH5P33151 784 aaPredicted RBP16.3■□□□□ 0.2
MUC1-220ENST00000498431 THOP1P52888 689 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 KCNC4Q03721 635 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 SPIDRQ14159 915 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 ZSCAN30Q86W11 494 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 FAM71AQ8IYT1 594 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 NAT6Q93015 286 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 RAB7BQ96AH8 199 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 ISG20Q96AZ6 181 aaKnown RBP16.3■□□□□ 0.2
MUC1-220ENST00000498431 C18orf8Q96DM3 657 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 KLHL32Q96NJ5 620 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 CCNL2Q96S94 520 aaPredicted RBP16.3■□□□□ 0.2
MUC1-220ENST00000498431 MAGEB5Q9BZ81 275 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 WDR70Q9NW82 654 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 PADI4Q9UM07 663 aa16.3■□□□□ 0.2
MUC1-220ENST00000498431 SPTA1P02549 2419 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 GTPBP10A4D1E9 387 aaKnown RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 RIOK3O14730 519 aaKnown RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 MMP20O60882 483 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 WISP1O95388 367 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 FGFR1OPO95684 399 aaKnown RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 ANXA6P08133 673 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 SCNN1AP37088 669 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 RPIAP49247 311 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 PTK2BQ14289 1009 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 TGIF1Q15583 401 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 ATXN7L2Q5T6C5 722 aaPredicted RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 FAXCQ5TGI0 409 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 TAF3Q5VWG9 929 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 DPY19L2P1Q6NXN4 242 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 PRICKLE2Q7Z3G6 844 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 PLPP6Q8IY26 295 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 KYQ8NBH2 561 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 TMEM35BQ8NCS4 154 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 ARHGEF2Q92974 986 aaKnown RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 GLMNQ92990 594 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 FOXP3Q9BZS1 431 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 SLC13A1Q9BZW2 595 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 SIRPGQ9P1W8 387 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 PPARGC1AQ9UBK2 798 aaKnown RBP16.29■□□□□ 0.2
MUC1-220ENST00000498431 TMEM59LQ9UK28 342 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 AHCTF1Q8WYP5 2266 aa16.29■□□□□ 0.2
MUC1-220ENST00000498431 LRP4O75096 1905 aa16.28■□□□□ 0.2
MUC1-220ENST00000498431 FAM72CH0Y354 149 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms